Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1857 ATGGCAATGGAGTGGCTGGAAATCTTCTTGGTGGCAACATGCTCCATAGGCTTCATCACTCGTTTCAAAGCTTTCATCTATTTTGTGAGGTGGATGTGGGTTATGTTTATACGGCCATCCAAGAATCTCAAAACCTATGGTTCATGGGCTATTGTCACTGGTTCGACCGATGGAATCGGCAAAGCCATTTCCTTGGAAGTGGCTTCCAAAGGACTCAACGTCCTTCTGGTTGGTCGAAACCCTAAAAAGCTCGAAGCCACATCGAAGGAGATGAGAGACACACATGGTGAACATGTTGAAGTGAAGCTTGTGGTGATAGACTTTAAGAAAGTTAATGGAGAAGAAATACTGAAGAAGATAGAGGAAGAAACTCAAGGTTTAGATGTGGGTGTGTTGGTGAATAACGTAGGAATGGCAAGTCCTTATCCGAGAAAGAAAAAAGGAGTCATCGTCAACATTGGTTCTGGTTCATGCTCTATTATTCCTTCCTATCCTCTGTGTTCTCTCTATGCTGCTACAAAAGCCTTAAGATATTTGTGGATGTTATCAAAATGCATCGATTTAGAATACAAATCAAAAGGGATTGACATCCAGTGCCAGGTACCAATGTTTGTGGCAACGAAGATGGTGAAACTGAAGACGTCCTTATATATTTATTCCAACTGCTAA 669 0.417 MAMEWLEIFLVATCSIGFITRFKAFIYFVRWMWVMFIRPSKNLKTYGSWAIVTGSTDGIGKAISLEVASKGLNVLLVGRNPKKLEATSKEMRDTHGEHVEVKLVVIDFKKVNGEEILKKIEEETQGLDVGVLVNNVGMASPYPRKKKGVIVNIGSGSCSIIPSYPLCSLYAATKALRYLWMLSKCIDLEYKSKGIDIQCQVPMFVATKMVKLKTSLYIYSNC 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1857 222 PIRSF 11-beta-HSD1 143 220 - -
Alju06g1857 222 PIRSF 11-beta-HSD1 1 146 - -
Alju06g1857 222 PANTHER RH59310P 145 215 - -
Alju06g1857 222 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 211 IPR036291 -
Alju06g1857 222 Gene3D - 42 140 - -
Alju06g1857 222 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Alju06g1857 222 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Alju06g1857 222 PRINTS Glucose/ribitol dehydrogenase family signature 193 210 IPR002347 -
Alju06g1857 222 Pfam short chain dehydrogenase 49 141 IPR002347 -
Alju06g1857 222 Pfam short chain dehydrogenase 144 212 IPR002347 -
Alju06g1857 222 Gene3D - 141 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1857 Alju-ChrAlju06 39982740 39984380 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1857 5 218 Lipid Metabolism Gene Families AT1G67730 41.129 2.13e-63 198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g0818 03 33324629 33328538 Alju06g1857 06 39982740 39984380 CCT
Alju06g1857 06 39982740 39984380 Alju06g1857 06 39982740 39984380 ECH