Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1799 ATGGCTCTTGTTGTCGATACTCCATTGGGTATTCTCAATGCTGCTTTCTTCATCGCTTTATTGTTATGGATTTTGATTGATAGTTTGAGAGAAAGCAGGCGTAGCGATGTTGTGTATTTGAAACACGTACCAAAACGATTCGCCGTCTTCTCCGCAATCACGCTTTTGGTTCATGTTGTTCTTTCGGTTTTGAACTTGGCTTTTGCGTTTCATGAGTATTGGAGCGAGAAAATAGTGTCGTATTGCTCTGTTTCTTTGGCTCTCACTTGGGTTTTAGCTACTTTGGTTTCGGTGTACTCCGTGAAGAGAATACGCCGCCACCCCAAAACGTGGCCTCTCGTTTTGATTCTCTGGTGGTTCTTCACCACTGTATTGGATTCAATCTTCGTTTCTGTGAAACTCGTGAAGAATTTCAAATCCTTGGATTTGTCTTTCTTTCTGTCAGAGGAAAACTTGGTGGATTTCGTTTCCTTGCTTCTGTTGTTACTTCTCTGGTTGAATGCTCTGCCTTCTGTATGGACGAGAAAATCCAATGAATCTGAACAAGGGTTGCTTCAAAAGGAGGAAGACGAAGATGAAGAAGAAGATAAGGAAGCATTTATAAATGCTGGAATATGGAGCAAGCTCACGTTTAAATGGCTGAATCCTATTTTCAGGAGAGGTCAGATGCAGAAACTTGAACTTACTCATATACCTTCAGTTCCTCAATCTGAAACTGCAGAATATGCTTCTTCCATGCTCGAAGAATCACTGCGAAAACGAAAACTCGAAAAGGGTTCACTGGCAAAAGCTATGGCTCATTTTATCTGGAAATCCTTGGCCTTGAATGCAGTATTTGCAGGTATTAACACAATGGCCTCTTACATGGGTCCCTTGTTGATCACAAACTTTGTGAATTTGTTGTCTGGAAATTATAACGATTCAAACATCCACTACGGGCTAATTCTTGCTTTCATCTTCTTCCTGGCGAAGACTGTGGAATCACTAACTCAAAGACAATGGTACTTTGGAGCTCAACGAATAGGAATCCGAGTCCGTGCAGCTCTCATGGGTCTAATATATGTCAAATCACTAACAATCAAGTGTGGGGGACCAACACAAGGCAAAATCACAAACTTCATAAATGTGGATGCTGAAAGGATTGGAGATTTCTGCTGGTACATTCATGGAGTATGGCTGCTTCCGGTTCAGGTTGTTTTGGCCTTGGTTATCTTGTACAGGAATTTAGGATTCACACCCTCCATTGCTGCATTTGCTGTAACTGTTTTGGTCATGGTTTGCAACACTCCCATGGCTCATATGCAGGAAAGTCATCACTCCAAGATTATGGAAGCTAAGGATTCGAGGATTAAGGCTACTTCGGAGATACTAAAGAACGTGAGGATTCTGAAATTGCATTCTTGGGAATCCGCATTTCTGAAGAAGCTGCATCAGCTTAGGGAAACTGAGAAGAGCTGGCTTAAGAAGTATCTCTATACTTCCTCAGCAGTGACATTTCTGTTTTGGACTTCGCCAACTCTGGTTTCTGTGGTCACTTTTGGTGTCTGTATAATGGAGAAAACTGAATTAACTGCAGCCACAGTGCTCTCAGCTTTAGCAACTTTTCGTATCTTACAAGAACCAATCTATAACTTACCTGAGCTTGTGTCCATAATAGCTCAAACAAAAGTGTCCATTGATAGAATCCAAGAGTTCATTAAAGAAGAGGATCAAATGCAGTTCATGACTAAGCCTACATTGAAACCTTCTGATGTTGAGCCTACATTGAAACCTTCTGATGTTGCCATTGACATTAAAGCAGGTGAATACTCATGGGAAGCTGATGATCAATACAATAGGAAACCAACTATTCAAATTACAGAGGAGTTGAAGATAGAGAAAGGTCAAAAGGTTGCAATATGTGGGTCCGTGGGGTCTGGCAAATCAAGCCTGCTATGCTGTATGCTTGGTGAGACTCCGAAGATTTCAGGGGTAGGAATTGAAGTATATCGATATAAAAGTTATGTGCCCCAAAGTCCTTGGATTCAATCAGGGTCAGTAAGAGAAAATATACTGTTTGGCAGGAAAATGAACATGGAATTGTATGAGAAAGTCCTGGAATGTTGTGCATTGAATCAGGATATCAAACAGTGGGAAGATGGAGATTTGACCATGGTGGGGGAGAGGGGCATAAACTTAAGTGGAGGCCAAAAACAGAGAATTCAACTGGCAAGGGCTGTTTACAATGATTCAGATATTTATTTCCTAGATGACCCTTTCAGTGCTGTTGATGCTCACACTGGGACTCATTTATTTAAGAAATGTCTCTTAGAACTTCTATCTGAGAAAACTGTTGTTTATGCTACGCATCAACTGGAATTTTTGGAAGCTGCTGATCTTGTCTTGGTAATGAAAGATGGGAAAATAGTTGGGTCAGGAAAGTATAAAGATCTGATAGCTTGTCCCAGTTGTGAACTTGTTGATCAAATGGCTGCTCATAAGGAAACAATAAAGCAAATCAGACCATGCTGCGAGGATAATTCCTTATCCAAGAACTGTACACCATTTCAAACGCCCCAAATTGAAGTAGCTGAAGCAAACCCTGCCATGAACCGTGAAGAAAACAAGAATTTGGAGAGAAACAAAGAAGAGAAGAAAGCAGAGACGGGTCGAGTTGATTGGAGTGTTTACTCAACTTTTGTCACCTTTGCTTATAAAGGTGCATTAGTTCCCGTTATTCTCCTATGCCAAATTCTCTTTCAAGGAATGCAAATGGGAAGCAATTATTGGATTGCTTGGGCTGCAGAACAAAGAAACAATGTTAGTAAACGGACGCTTATGGGGACCTTTGTTTTGCTATCTGGTGGCAGTTCCTTCTTTATATTGGGAAGGGCTGTGTTCATGGCAAAAATTGCTGTAGAGACAGCTCAACGTCTTTATCACGAAATGATTACATCAGTTTTCAGAGCTCCTATTTCTTTTTTTGATACTACTCCATCAAGCAGAATCTTGAATAGGTGTTCCACAGATCAAAGTACATTAGATACAGATATACCATACAGACTAGCTGGGCTTGTATTTGCACTCATCCAGTTATTGAGTATCATCATTCTAATGTCCCAAGTTGCTTGGCAAGTCATTCTTTTCTTCATTGTGGTGCTTTCAATCTCCATCTGGTATCAGGCTTATTACATTACTACAGCTAGAGAATTGGCCAGGATGGTAGGGATCAGGAAGGCTCCAATCTTGCATCACTTTTCAGAATCAATTGCCGGGGTGGCCACAATTCGTTGTTTCAATCAACAACAAAGATTTTATACGAAAGTTATGTCTCTAGCTGATGATTATTCTCGTGTGGCATTTCATAATTATGCCACCATGGAATGGTTGTCTGTTAGGATAAACTTTCTCTTTAATCTAGTCTTCTTTTTCATTCTCATTATCTTGGTTACACTGCCAAGGCCTGCCATTGATCCCAGCTTGGCAGGTCTGGTAGCTACTTATGGTTTGAACTTGAGTGTTCTTCAGGCTTGGGTAATATGGAACCTCTGCAATGTGGAGAACAAAATGATATCAGTGGAGAGGATACTACAATTCACTAAGATACCAAGTGAAGCTCCACTGATAATCCAAGATTGTAGGCCCCAACTAGAGTGGCCCAGGGAGGGAAAAATTGAGCTTCACAATCTTCACATACAGTATGATCCTGCAGCTCCTATGGTTCTTAAAGGTGTCACTTGCACCTTTCCAGGACACGAGAAGATTGGAGTTGTAGGGAGGACAGGAAGTGGAAAATCCACCTTAGTGCAAGCTCTCTTCCGAGTGGTTGAACCTTCAGCAGGACGTATACTTATTGACAGCGTAGATATTTGCAAGATTGGCCTCAAGGACTTAAGATCTAGGCTTGGTATTATCCCTCAGGATCCTACCTTGTTTCAAGGTACTGTAAGGAACAACTTGGATCCTCTAGAACAACACTCTGATCATGAACTCTGGGAGGTGCTCGGTAAGTGCCATCTTGGTGATATAGTTAGGAAGGATCCAAGGCTTCTAGATGCATCAGTGGCTGAGAACGGAGAGAATTGGAGTGTTGGACAAAGGCAGCTTGTTTGTCTTGCTAGGTTGCTATTGAAGAAAAGAAGAATTTTGGTTCTTGATGAAGCTACTGCTTCGATTGACACAGCGACCGATAATTTAATTCAGAGGACTATTAGGGAAGAGACAAGTAAATGCACAGTCATTACAGTGGCTCATAGGATTCCTACAGTTATTGATAATGATCGTGTATTGGTCCTTGATGAAGGGAGGATTGCAGATACAGAATGTGAAGATCCTGAAGAAGTCACTGACCAAAACTCAACCGTACATAACAAAAAAGTGGCTGAGAATGGAGAAAATTGGAGTGTTGGACAGAGGTAG 4398 0.4127 MALVVDTPLGILNAAFFIALLLWILIDSLRESRRSDVVYLKHVPKRFAVFSAITLLVHVVLSVLNLAFAFHEYWSEKIVSYCSVSLALTWVLATLVSVYSVKRIRRHPKTWPLVLILWWFFTTVLDSIFVSVKLVKNFKSLDLSFFLSEENLVDFVSLLLLLLLWLNALPSVWTRKSNESEQGLLQKEEDEDEEEDKEAFINAGIWSKLTFKWLNPIFRRGQMQKLELTHIPSVPQSETAEYASSMLEESLRKRKLEKGSLAKAMAHFIWKSLALNAVFAGINTMASYMGPLLITNFVNLLSGNYNDSNIHYGLILAFIFFLAKTVESLTQRQWYFGAQRIGIRVRAALMGLIYVKSLTIKCGGPTQGKITNFINVDAERIGDFCWYIHGVWLLPVQVVLALVILYRNLGFTPSIAAFAVTVLVMVCNTPMAHMQESHHSKIMEAKDSRIKATSEILKNVRILKLHSWESAFLKKLHQLRETEKSWLKKYLYTSSAVTFLFWTSPTLVSVVTFGVCIMEKTELTAATVLSALATFRILQEPIYNLPELVSIIAQTKVSIDRIQEFIKEEDQMQFMTKPTLKPSDVEPTLKPSDVAIDIKAGEYSWEADDQYNRKPTIQITEELKIEKGQKVAICGSVGSGKSSLLCCMLGETPKISGVGIEVYRYKSYVPQSPWIQSGSVRENILFGRKMNMELYEKVLECCALNQDIKQWEDGDLTMVGERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLLELLSEKTVVYATHQLEFLEAADLVLVMKDGKIVGSGKYKDLIACPSCELVDQMAAHKETIKQIRPCCEDNSLSKNCTPFQTPQIEVAEANPAMNREENKNLERNKEEKKAETGRVDWSVYSTFVTFAYKGALVPVILLCQILFQGMQMGSNYWIAWAAEQRNNVSKRTLMGTFVLLSGGSSFFILGRAVFMAKIAVETAQRLYHEMITSVFRAPISFFDTTPSSRILNRCSTDQSTLDTDIPYRLAGLVFALIQLLSIIILMSQVAWQVILFFIVVLSISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGVATIRCFNQQQRFYTKVMSLADDYSRVAFHNYATMEWLSVRINFLFNLVFFFILIILVTLPRPAIDPSLAGLVATYGLNLSVLQAWVIWNLCNVENKMISVERILQFTKIPSEAPLIIQDCRPQLEWPREGKIELHNLHIQYDPAAPMVLKGVTCTFPGHEKIGVVGRTGSGKSTLVQALFRVVEPSAGRILIDSVDICKIGLKDLRSRLGIIPQDPTLFQGTVRNNLDPLEQHSDHELWEVLGKCHLGDIVRKDPRLLDASVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDNLIQRTIREETSKCTVITVAHRIPTVIDNDRVLVLDEGRIADTECEDPEEVTDQNSTVHNKKVAENGENWSVGQR 1465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1799 1465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 622 814 IPR027417 -
Alju06g1799 1465 ProSitePatterns ABC transporters family signature. 726 740 IPR017871 GO:0005524|GO:0016887
Alju06g1799 1465 Gene3D - 1201 1457 IPR027417 -
Alju06g1799 1465 SUPERFAMILY ABC transporter transmembrane region 905 1200 IPR036640 GO:0005524|GO:0016020
Alju06g1799 1465 FunFam ABC transporter C family member 5 865 1199 - -
Alju06g1799 1465 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 589 824 IPR003439 GO:0005524
Alju06g1799 1465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1210 1433 IPR027417 -
Alju06g1799 1465 CDD ABC_6TM_ABCC_D2 903 1193 IPR044726 GO:0140359
Alju06g1799 1465 CDD ABC_6TM_ABCC_D1 275 562 IPR044746 GO:0140359
Alju06g1799 1465 CDD ABCC_MRP_domain2 1216 1438 - -
Alju06g1799 1465 FunFam ABC transporter C family member 10 257 570 - -
Alju06g1799 1465 Gene3D ABC transporter type 1, transmembrane domain 864 1199 IPR036640 GO:0005524|GO:0016020
Alju06g1799 1465 FunFam ABC transporter C family member 3 1201 1454 - -
Alju06g1799 1465 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 905 1181 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju06g1799 1465 Pfam ABC transporter 623 753 IPR003439 GO:0005524
Alju06g1799 1465 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 274 554 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju06g1799 1465 Pfam ABC transporter transmembrane region 275 541 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju06g1799 1465 Pfam ABC transporter transmembrane region 920 1144 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju06g1799 1465 FunFam Multidrug resistance-associated protein 4 584 841 - -
Alju06g1799 1465 SUPERFAMILY ABC transporter transmembrane region 268 570 IPR036640 GO:0005524|GO:0016020
Alju06g1799 1465 SMART AAA_5 1244 1429 IPR003593 GO:0016887
Alju06g1799 1465 SMART AAA_5 627 801 IPR003593 GO:0016887
Alju06g1799 1465 Pfam ABC transporter 1235 1383 IPR003439 GO:0005524
Alju06g1799 1465 Gene3D ABC transporter type 1, transmembrane domain 247 575 IPR036640 GO:0005524|GO:0016020
Alju06g1799 1465 Gene3D - 592 838 IPR027417 -
Alju06g1799 1465 CDD ABCC_MRP_domain1 596 801 - -
Alju06g1799 1465 MobiDBLite consensus disorder prediction 1436 1465 - -
Alju06g1799 1465 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1218 1452 IPR003439 GO:0005524
Alju06g1799 1465 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 202 1448 - -
Alju06g1799 1465 MobiDBLite consensus disorder prediction 1447 1465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1799 Alju-ChrAlju06 37024777 37031044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1799 564 812 Calmodulin-binding Proteins AT2G36910 29.213 1.96e-22 103