Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1797 ATGTATTTATCAGAGAAACCTCGCCCTATCGACTTCTACAAAGAAGAAGGAAGTCGAGATATGATGATCGAGGTTGTCTCAAATGGAGAGCTTCCTCCACCTCACCAACAACCCCCACAACATCAAATGATTCTCGGCGAGAGTAGTGGTGAGGACCACGAAGTTGAAATTAAGGCTCCCAAGAAGCGTGCTGAGACTTGGGTTCAAGACGAGACACGGAGTTTGATAGCCCTTCGCCGTGAGATGGATGGGCTTTTCAATACATCCAAGTCCAACAAGCATTTGTGGGAACAAATATCGGCGAAGATGAGAGAGAAGGGGTTTGATCGCTCGCCCACTATGTGCACTGACAAATGGAGGAATCTGTTGAAAGAATTTAAGAAGGCTAAGCACCAGGATAGGGGAAGTGGGTCTGCTAAGATGTCTTATTATAAAGAAATTGAGGAGATTTTGAGGGAGAGGAATAAGAGTATGCAGTACAAGAGCCCTACACCTCCTAAGGTTGATTCTTATATGCAGTTTGCAGATAAAGGTATTGATGATACCAGCATCTCTTTCGGCCCAGTTGAAGCAGCTGGCAGACCAACACTCAATCTTGAGAGGCGTTTGGATCATGATGGACATCCTCTTGCCATTGCTGCAGCTGATGCTGTTGCCGCAAGTGGAGTTCCTCCTTGGAATTGGAGAGAAACTCCTGGAAATGGTGCGGAAGGTCAGTCATGTTGTGGGAGGGTCATATCAGTCAAATGGGGTGATTATACGAGAAGAATAGGTATAGATGGCACTTCTGATGCCATCAAGGAGGCAATAAGGGCTGCTTTTAGGTTGAGAACTAGACGTGCATTTTGGTTGGAGGATGAAGACCAGATAATCAGAAGTCTTGACCGTGACATGCCTTTAGGAAGTTACACTCTTCACCTAGACGAAGGAATGGCCATTAAAGTATACCTCTATGATGAATCTGACCATATCGCTGTTACTGAGGATAAGATCTTTTACACTGAAGATGATTACCGTGATTTCTTGGCACGTCGGGGCTGGACATGTCTGAGGGAAGTTGATGGCTACAGAAACATTGAGAATATGGATGATCTTCGACCTGGTGCCATATACCGCGGTGTAAGTTGA 1128 0.4548 MYLSEKPRPIDFYKEEGSRDMMIEVVSNGELPPPHQQPPQHQMILGESSGEDHEVEIKAPKKRAETWVQDETRSLIALRREMDGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKEIEEILRERNKSMQYKSPTPPKVDSYMQFADKGIDDTSISFGPVEAAGRPTLNLERRLDHDGHPLAIAAADAVAASGVPPWNWRETPGNGAEGQSCCGRVISVKWGDYTRRIGIDGTSDAIKEAIRAAFRLRTRRAFWLEDEDQIIRSLDRDMPLGSYTLHLDEGMAIKVYLYDESDHIAVTEDKIFYTEDDYRDFLARRGWTCLREVDGYRNIENMDDLRPGAIYRGVS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1797 375 Gene3D - 67 129 - -
Alju06g1797 375 FunFam trihelix transcription factor GT-1 67 129 - -
Alju06g1797 375 Pfam Myb/SANT-like DNA-binding domain 66 150 IPR044822 -
Alju06g1797 375 ProSiteProfiles Myb-like domain profile. 59 123 IPR001005 -
Alju06g1797 375 PANTHER FI21293P1 42 374 - -
Alju06g1797 375 SMART sant 63 125 IPR001005 -
Alju06g1797 375 CDD GT1 65 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1797 Alju-ChrAlju06 36629245 36633856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1797 1 374 Trihelix Transcription Factor Family AT3G25990 69.072 0.0 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju06g1797 Myb_DNA-bind_4 6.4e-21 CL0123