Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1772 ATGATGGATGCTGCCGAGGTTGAAGAAAATCTGTTTGCAGCAAGTGATGCCAAGTTACATGGAGAAATTTGCAAGGCTCTTTCTACAATGTATTGCAAAGTATCGTCAATATTTCCATCCTTAGAAGCAACTAGACCTAGGAGCAAAGCTGGCATTGAGGCTTTATGTTCATTGCATGTAGCCCTAGAGAAGGCCAAGAATGTTCTTCAGCACTGCACAGAGTGTAGTAAACTTTACTTGGCTATAACTGCCGATGTTGTTCTTCTAAAATTTGAGAAGGCTAAATCTGCTATTCAAGATGGCCTTAAGCAGGTGGAAGATATTGTCCCGCGATCTATTGCATGTCAGTGTCAGGAGATTGTGAATGAACTCGAAGGTGTAAAATTTCAACTTGACCCAATGGAGAAGCAAGTTGGTGCTGATTTAATTTCACTGCTTCAGCAAGGGAGACAATGTGGCGACTCTAGTGACGCCAGTGAACTTGAATGTTTTCACCAGTGTGCTATTAGGCTTGGAATCACATCTTCAAGAGAAGCTCTTACTGAAAGAAGAGCTCTCAAGAAGCTCATTGAGAGAGCTAGGGCTGAGGAAGACAATCAGAAGGAATCAAAAGTTGCTTATCTTCTACACCTCATGAGGAAATATTCCAAGTTATTTAAAACTGAAATTTCAGATGATAATGATTCACAGGGTTCTGCTCCTTGTTCTCCCAGTACTCCTAATACTCAATGTCAGGCATTCGAAAGAGAGATCTCAAAACGCTTTGCCATGAATTTGAATCCAATCAATAGCAAATTGGGACAGATGCCTCTTCCGCCTGAAGAGTTGAGGTGTCCATTATCTTTGCAGCTTATGTATGATCCTATCATCATTGTTTCCGGGCATACTTATGAAAGGGTTTGCATTGAGAAATGGTTCAGAGATGGACACAAAACTTGCCCCCAGACTCAACAGAAACTTGACCATCTCTTGCTGATTCCGAATTACTGTGTTAAGGGTCTTGTCATTAGTTGGTGTGAGCAGAATGGAGTTCCTGTTCCTGATGGCCCTCCTGAATCGTTTGAAATGAACTACTCGAGATTTGCGTTATCAGAACCTGAATCATCAACAAATTCAAAATCTGTCAACAGTTTGAGCTCATGCATGTTGAAGAGTGTCAAAGTGGTTCCCTCAGAAGAGAGCAGTATCTCAGAGGAAGCCAGGGTGGATAAAAACGAATGTTTTCCTGCAGAGGAGCAAGAGACAGAGAAGTGTCTTAGATTTCAGAAAGTTTTGGTTGAAGAGACCAATTACAACACGAAGTGCAATGTGGTTGAACAGTTAAGGATAATACTGAGGGATAACGAGGAAGCCAGGACTTATATGGGAGCTCATGGATTTGTCGAGGCACTTTTACAGTTTCTAAGGTCTGCTGTGTCTGAAGGGAATCTGAAAGCTCAGGAAAGTGGAGCAATGGCTCTCTTCAACCTTGCTGTGAATAACAACAGAAATAAGGCAATTATGTTATCAGCAGGAGTATTACCACTGCTGGAGGAAATTTCCAACACTAGTTCATATGGTTGTGCAACGGCCCTCTATCTGAATCTCTCTTGCCTTGAAGAAGCCAAGACCAAGATTGGGAAGACTCAGGCTGTCCAGTTCCTAATCTGTCTCCTCCAAGCCGACACCGAAGTCCAATGCAAGCAAGATTCTCTCCACGCACTCTATAATCTCTCCACTGTCCCTGCAAATATTCCAAACCTCCTCTCATCTAGGATCATCAATGGCCTTCTATCCCTTCTTTCAGACCAGGGTGATAATAATAGCATGTGGGAAGAGAAATGCATTCGTATTCTGATAAATTTGGCTGCTTCCAGTTTGGGAAAAGAGGAAATAATCTTAACTCCAGGACTCATTAATGCCCTGGCTAGGAAACTAGAATCTAGTGAGCTCTTAGAGCAAGAACAAGCTGTGACTTGTCTCTTAATCTTATGTAATGGGAATGAGAGATGTAGCCACAAGGTCCTACGAGAAGGTATAATACCTGCATTGGTTTTGATATCTGTAAATGGGACCCCAAGAGGGAAAGAAAAAGCTCAGAAACTTTTGATGCTCTTTAAAGAGCAGCGACAACGAGATCCTTCTCCTGTTAAGACGCGTTTGTGTCCCACTACTGCTCTTGAACCTAAGATGAATGTGGCTGTTGTTCCTCAGCCAGAAACAAAACCTGTGATGAGTAAGTCATTGTCTAGAAGAATAATTGAGAAGCCTTTTAGATTTTTCTCTAAAAGCAAGAGTTATTCTGTTTACCAGATTTAA 2298 0.4191 MMDAAEVEENLFAASDAKLHGEICKALSTMYCKVSSIFPSLEATRPRSKAGIEALCSLHVALEKAKNVLQHCTECSKLYLAITADVVLLKFEKAKSAIQDGLKQVEDIVPRSIACQCQEIVNELEGVKFQLDPMEKQVGADLISLLQQGRQCGDSSDASELECFHQCAIRLGITSSREALTERRALKKLIERARAEEDNQKESKVAYLLHLMRKYSKLFKTEISDDNDSQGSAPCSPSTPNTQCQAFEREISKRFAMNLNPINSKLGQMPLPPEELRCPLSLQLMYDPIIIVSGHTYERVCIEKWFRDGHKTCPQTQQKLDHLLLIPNYCVKGLVISWCEQNGVPVPDGPPESFEMNYSRFALSEPESSTNSKSVNSLSSCMLKSVKVVPSEESSISEEARVDKNECFPAEEQETEKCLRFQKVLVEETNYNTKCNVVEQLRIILRDNEEARTYMGAHGFVEALLQFLRSAVSEGNLKAQESGAMALFNLAVNNNRNKAIMLSAGVLPLLEEISNTSSYGCATALYLNLSCLEEAKTKIGKTQAVQFLICLLQADTEVQCKQDSLHALYNLSTVPANIPNLLSSRIINGLLSLLSDQGDNNSMWEEKCIRILINLAASSLGKEEIILTPGLINALARKLESSELLEQEQAVTCLLILCNGNERCSHKVLREGIIPALVLISVNGTPRGKEKAQKLLMLFKEQRQRDPSPVKTRLCPTTALEPKMNVAVVPQPETKPVMSKSLSRRIIEKPFRFFSKSKSYSVYQI 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1772 765 Gene3D - 423 619 IPR011989 -
Alju06g1772 765 SUPERFAMILY ARM repeat 421 699 IPR016024 -
Alju06g1772 765 PANTHER U BOX DOMAIN-CONTAINING 22 704 - -
Alju06g1772 765 SMART Ubox_2 275 338 IPR003613 GO:0004842|GO:0016567
Alju06g1772 765 SUPERFAMILY RING/U-box 272 348 - -
Alju06g1772 765 Gene3D - 622 698 IPR011989 -
Alju06g1772 765 ProSiteProfiles U-box domain profile. 271 345 IPR003613 GO:0004842|GO:0016567
Alju06g1772 765 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 271 345 IPR013083 -
Alju06g1772 765 SMART arm_5 532 573 IPR000225 GO:0005515
Alju06g1772 765 SMART arm_5 448 492 IPR000225 GO:0005515
Alju06g1772 765 FunFam RING-type E3 ubiquitin transferase 271 345 - -
Alju06g1772 765 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 459 505 IPR000225 GO:0005515
Alju06g1772 765 Coils Coil 176 203 - -
Alju06g1772 765 Pfam U-box domain 273 342 IPR003613 GO:0004842|GO:0016567
Alju06g1772 765 CDD RING-Ubox_PUB 273 325 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1772 Alju-ChrAlju06 32465197 32468874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1772 2 764 U-box Gene Family AT1G24330 61.261 0.0 917
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1772 06 32465197 32468874 Alju06g1772 06 32465197 32468874 ECH