Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1743 ATGGACTGGAATGCAAAGTCTTTACCGCAGTGGGATTGGGAACACCTACTTTTTAACACAAAAGCAACTGAGAATCCTAGGTTAAAGCCGGTTGGTTGGAGTGGCAAAGAAGATCGAGAAATCGATGTTGGGCTGTTCAATCCATCATGTCGTATTGATTGTTCTGGGTCTGAGCTACAGCATGCGTCTTCATCAAGGGGCTCAAAATCAGCTTCCATGAATTCTTCATCAAATGGGTATAGCAGAACATCAGTGCTCACTTTTGAAGGTTCCCAAGAAGATTCTAATGGTAAAAAAGAGAAGTCAAAAGAAGAGCCTGTTGGAAATTCTCCCTCACTTGAACATTTTTCTGTCTCTGGTGAACCATTGCACAGTCTAAAGCTAGGCAAACGGCTGTACTTTGAAGATGTCTGTGTTGGAAGTGATCCAAAGAACACATCTCACTCTGGGATTCCCATGCCATCTTTGAGTACTGGGAAAAAATGCAAGTCAAATAGTCAGAGCTCACAGCCTCCGCACTGCCAGGTTGAAGGCTGTGACCTTGACCTATCATCAGCTAAAGATTACCATCGCAAGCATAGAGTTTGTGAAAGTCATTCCAAATCCCCAAATGTGGTTGTAGATGGTAACGAGCGTCGGTTTTGCCAGCAATGTAGCAGGTTCCATGGTCTCTCAGAGTTTGATGGGAAAAAAAGAAGTTGCAGGCGTCGTCTTTCTGATCATAATGCTAGGCGTCGGAAGCCTCATCCTGAAGCTGTCCAATTGAATGCATCATTTTTGTCCTCATCATCATACGATACAGCTTCATTTGACATATCCGAGATTATGAGGAATTGGAGTCATGAACTTCAGATATTTTGCTGCTGTTATATGTATTTTGGTGGGAAGCAACAGATGAGCCCATTTACTAATTCAAGGGCCATCAACTTCGCTTGGCAGGATACATACAGCAGCAGGATCTCCCAAAAGAAAGAATTTCTCATGAAACCTGCAAAAGTAGGAGGTACCACTGGGCAGGTACATCAGCCGTTCAATGACATCCCCAGTACCTTTTTGAAGCCTTCTGAAGGTTCTGGTGGCCTTTGCACATCGAAAGGCATAGCAACAAAGACAATCAATCCAGGGATAGAAGATTTCATTACCTCATCAGATCTGAATGATCCACAAGATTTTCACCGTGCTCTCTCTCTTCTGTCAACCACCACCTCTTGGGGTCCATTCGACACAAAGTTTGCTTCTCAAGAGCACTCCAATCGCTCGACCCCTACCGTTACAACTCAGGCTTTATCACACTCAATGATTCAGTGCTTGCCTTATGCTTCATCAGACTACTGGCAGAATTGTCAACAACCAGTCGACAGCCATATGAGTGTCTCATACTCGGACTGTAAAGATGACAGTCACTTTGAAGATTTCCAGTTGCTTAGAGCACCCTATGAGTCTGGGTTTTGCAATCAGTTGGATCAACAAGAGTATCCGCATAGCTTAAACCTGTAA 1497 0.4389 MDWNAKSLPQWDWEHLLFNTKATENPRLKPVGWSGKEDREIDVGLFNPSCRIDCSGSELQHASSSRGSKSASMNSSSNGYSRTSVLTFEGSQEDSNGKKEKSKEEPVGNSPSLEHFSVSGEPLHSLKLGKRLYFEDVCVGSDPKNTSHSGIPMPSLSTGKKCKSNSQSSQPPHCQVEGCDLDLSSAKDYHRKHRVCESHSKSPNVVVDGNERRFCQQCSRFHGLSEFDGKKRSCRRRLSDHNARRRKPHPEAVQLNASFLSSSSYDTASFDISEIMRNWSHELQIFCCCYMYFGGKQQMSPFTNSRAINFAWQDTYSSRISQKKEFLMKPAKVGGTTGQVHQPFNDIPSTFLKPSEGSGGLCTSKGIATKTINPGIEDFITSSDLNDPQDFHRALSLLSTTTSWGPFDTKFASQEHSNRSTPTVTTQALSHSMIQCLPYASSDYWQNCQQPVDSHMSVSYSDCKDDSHFEDFQLLRAPYESGFCNQLDQQEYPHSLNL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1743 498 Pfam SBP domain 174 247 IPR004333 GO:0003677
Alju06g1743 498 SUPERFAMILY SBT domain 172 253 IPR036893 GO:0003677|GO:0005634
Alju06g1743 498 MobiDBLite consensus disorder prediction 93 108 - -
Alju06g1743 498 ProSiteProfiles Zinc finger SBP-type profile. 171 248 IPR004333 GO:0003677
Alju06g1743 498 FunFam Squamosa promoter-binding-like protein 14 165 235 - -
Alju06g1743 498 Gene3D - 164 235 IPR036893 GO:0003677|GO:0005634
Alju06g1743 498 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 59 381 IPR044817 GO:0003677
Alju06g1743 498 MobiDBLite consensus disorder prediction 143 174 - -
Alju06g1743 498 MobiDBLite consensus disorder prediction 59 118 - -
Alju06g1743 498 MobiDBLite consensus disorder prediction 59 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1743 Alju-ChrAlju06 29003170 29005696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1743 1 250 SBP-box Gene Family AT5G43270 50.192 2.80e-56 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Alju06g1743 SBP 2.8e-32 No_clan