Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1727 ATGCAACCTGCTTACAATATTAATGATCTGTACCAAGAAGCTCAAACGCGATGGCTGAAGCCTGTAGAAGTGATGTACATTTTACAGAATCATGAACAGTATCAGATTACTCAAGAGACCCCACAGCAGCCATCCAGTGGATCCTTGTTCCTGTTTAACAAAAGAGTTCTGCGCTTTTTTCGTAAAGATGGTCATAATTGGCGGAAGAAAAAAGATGGAAGAACTGTGGGAGAAGCACATGAACGACTTAAGGTTGGAAATGTTGAGGCCTTAAATTGTTATTATGCACATGGAGAGCAGAACCCCACTTTTCAGAGGCGGAGCTATTGGATGTTGGAGCCGGCTTATGAGCATATTGTTCTGGTACACTACAGAGAAACATGTGAGGGAAGGTCAAATTCTGGACCTGGTACACAACAGTCGCCAGGATCCTCGTCTACATTTTGTCAGAGTCCTGGCTCATACACTACCCAGAAGCTAGGGTCAACATCCATGTTTGGTGATTCATGTGAACCTAATCAGAGTTTCTCCAGTCCTTTATCGGTAGAATTCGCATCTGATACAGCCATCAAGAATAAGGGAATGGATCACTTGGATGGAAAAGAGGCAGAGCCAGGAAATTCAACTGAACATGAGGTTACACAAGCTCTGCGCCGACTGGAGGAGCAGTTAAGTCTGAATGAGGACAGCTTCAAAGAAATTGATTCCTTCAGTGGCAAGCAGGAGAACTCACATGATTCTAGCCCACAACAAAATACAATGGCAATCAGCAATCAACAAGATGTTAATGCAGCTTGGCCTGCACTGAGTGATCATGGCCAATCTTATGATGGGCGTAGTGCTGGACAAGACCATAATTGCTCTGATGGAATTGAGAAGACTTTGTACTGGAGGGAGATGTTGGATTCATGCAAGCCCTTGTCCTCGGCCAGTTTGCAAGAGAAACACATGTACAGACCAGCTGGAAATGAAAACTCACTTTCGTCTTCAGGAAGGTTACCAATTACCAACCATGAAAGCAGTCACTGGATAAGCTTTGGCAGTAACAATGCTGAAAACTCTGCCTTTTCACTGACTCAAGACATTCATGGAGTCATATTTTCTCCTTATTCTTCTATAGAAACTCAAGAAGCTAATTTGGACTGTTATGCATCATTTTTTGACCAAAACCAAATTGAAGCTCCTCCGGATGTTGATTTAAGTTTGACTGTTGCACAAAAGCAGAAGTTCACAATTAAGGAAGTATCTCCAGAATGGGGTTATGCTACTGAAGCCACAAAGGTTATAATTGTTGGATCATTTCTCTGTCATCCCACGAGTTCTACCTGGGCTTGTTTGTTTGGTGAACATGAAGTTCCTGTTGAAATAATTCAAGATGGTGTGATCCGCTGTGAAGCTCCATCTCACCTTCCTCCTGGAAAGGTTACTCTCTGCATTACCTCTGGGAATCGTGAGTCCTGCAGTGAAGTTCGTGAGTTTGAGTATCGCAATAAGGATAGTTGCCCTCACTGCAATTCATTAGAAACAGAATCCACTAGAAGTCCTGAAGAACTGTTATTACTTGTTAGATTTGCGCAGATGATCCTTTCCAATTCGACAGAATCTGGAAATTATGAACTGGGAAAACAGAAATACAATGATGATTCATGGAGCCATGTTATTGAGGCCCTTCTAGTTGGCAGTGGAACTTCATCTGGTACTGTTGATTGGCTTCTTGAAGAGCTTCTAAAGGATAAGCTGAAGTTGTGGCTTTCCTCCAGATCCCACAAAACAAATGAAGAGACAGGCTCTTCTTTGTCCAAAAAGGAGCAGGGCATTATACACATGGTTGCTGGGTTGGGTTTTGAGTGGGCTTTGAACCCCATTCTCAGCTGTGGTGTGAACATAAATTTCCGTGACATCAATGGTTGGACTGCCCTGCATTGGGCTGCACGCTTTGGAAGGGAAAAAATGGTCGCTTCACTTATCGCTTCTGGTGCATCTGCTGGAGCAGTGACGGATCCAACTACCCAAGATCCAACTGGTAAAACAGCTGCTTCTATTGCAGCCAACAGTGGGCATACGGGTCTGGCAGGTTATCTTTCGGAGGTATCTCTAACAAGCCATTTATCTTCCCTCACCCTGGAAGAATGTGAGCTGTCTAAAGGTTCAGCTGAGCTTGAAGCAGAGTTAACTGTAAGTACTGTCTCTAAGGAGCATCTAACAGCCAGTGAAGATCAGATTTCACTCAAACATACCTTGGCTGCTGTGCGTAATGCAGCTCAAGCAGCTGCACGTATACAGTCTGCTTTTCGTGCACATTCCTTTAGGAAACGGAGAGAGAGAGAAGCTGCCATTTCTGCAGCAGCCGCCATATCAATTCAGAAGAAATATCGAGGATGGAAAGGCCGCAAAGATTTTTTAGCATTACGCAAGAAAGTAGTGAAGATACAGGCTCATGTAAGGGGTTACCAGGCTAGAAAGCATTACAGGATAATATGTTGGGTAGTTGGGTTCTTTGACAAGGCTGTGCTACGATGGAAGAGGAAAGGAACCGGTTTACGAGGTTTTCGACAGGAGAGAAACTCAATTGATGAAAATGAAGATGAAGATATTCTCAAGGTGTTCCGAAAGCAGAAAGTAGATGAAGCAGTTGAACAGGCTGTTTCACGGGTGCTGTCCATGGTAGATTCTCCAAATGCTCGCCAACAATATCATCGCGTGCTTGAAAAGTTTCGTCAAGCTAAGGCTGAACTCGGCAGCACAAGTCAAGGGGTGCCATTATCTTTTGTGAAGGATGCTTCCAATATGGAAGATGATGACTTAAATCAGTTTCCCTAG 2820 0.4379 MQPAYNINDLYQEAQTRWLKPVEVMYILQNHEQYQITQETPQQPSSGSLFLFNKRVLRFFRKDGHNWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSYWMLEPAYEHIVLVHYRETCEGRSNSGPGTQQSPGSSSTFCQSPGSYTTQKLGSTSMFGDSCEPNQSFSSPLSVEFASDTAIKNKGMDHLDGKEAEPGNSTEHEVTQALRRLEEQLSLNEDSFKEIDSFSGKQENSHDSSPQQNTMAISNQQDVNAAWPALSDHGQSYDGRSAGQDHNCSDGIEKTLYWREMLDSCKPLSSASLQEKHMYRPAGNENSLSSSGRLPITNHESSHWISFGSNNAENSAFSLTQDIHGVIFSPYSSIETQEANLDCYASFFDQNQIEAPPDVDLSLTVAQKQKFTIKEVSPEWGYATEATKVIIVGSFLCHPTSSTWACLFGEHEVPVEIIQDGVIRCEAPSHLPPGKVTLCITSGNRESCSEVREFEYRNKDSCPHCNSLETESTRSPEELLLLVRFAQMILSNSTESGNYELGKQKYNDDSWSHVIEALLVGSGTSSGTVDWLLEELLKDKLKLWLSSRSHKTNEETGSSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDINGWTALHWAARFGREKMVASLIASGASAGAVTDPTTQDPTGKTAASIAANSGHTGLAGYLSEVSLTSHLSSLTLEECELSKGSAELEAELTVSTVSKEHLTASEDQISLKHTLAAVRNAAQAAARIQSAFRAHSFRKRREREAAISAAAAISIQKKYRGWKGRKDFLALRKKVVKIQAHVRGYQARKHYRIICWVVGFFDKAVLRWKRKGTGLRGFRQERNSIDENEDEDILKVFRKQKVDEAVEQAVSRVLSMVDSPNARQQYHRVLEKFRQAKAELGSTSQGVPLSFVKDASNMEDDDLNQFP 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1727 939 SUPERFAMILY E set domains 411 496 IPR014756 -
Alju06g1727 939 SMART iq_5 752 774 IPR000048 GO:0005515
Alju06g1727 939 SMART iq_5 802 824 IPR000048 GO:0005515
Alju06g1727 939 SMART iq_5 779 801 IPR000048 GO:0005515
Alju06g1727 939 ProSiteProfiles IQ motif profile. 803 827 IPR000048 GO:0005515
Alju06g1727 939 FunFam Calmodulin-binding transcription activator 2 779 827 - -
Alju06g1727 939 Pfam Ankyrin repeats (3 copies) 617 695 IPR002110 GO:0005515
Alju06g1727 939 Gene3D - 547 700 IPR036770 -
Alju06g1727 939 FunFam Calmodulin-binding transcription activator 2 405 500 - -
Alju06g1727 939 CDD IPT 411 496 - -
Alju06g1727 939 ProSiteProfiles CG-1 DNA-binding domain profile. 7 133 IPR005559 GO:0003677
Alju06g1727 939 SUPERFAMILY Ankyrin repeat 604 696 IPR036770 -
Alju06g1727 939 MobiDBLite consensus disorder prediction 131 153 - -
Alju06g1727 939 Pfam IPT/TIG domain 411 495 IPR002909 -
Alju06g1727 939 Pfam CG-1 domain 13 126 IPR005559 GO:0003677
Alju06g1727 939 ProSiteProfiles Ankyrin repeat profile. 635 667 IPR002110 GO:0005515
Alju06g1727 939 ProSiteProfiles Ankyrin repeat region circular profile. 635 661 - -
Alju06g1727 939 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 756 829 IPR027417 -
Alju06g1727 939 ProSiteProfiles IQ motif profile. 780 809 IPR000048 GO:0005515
Alju06g1727 939 ProSiteProfiles IQ motif profile. 753 782 IPR000048 GO:0005515
Alju06g1727 939 MobiDBLite consensus disorder prediction 269 288 - -
Alju06g1727 939 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 6 911 - -
Alju06g1727 939 SMART CG_1_2 10 128 IPR005559 GO:0003677
Alju06g1727 939 FunFam Calmodulin-binding transcription activator 4 isoform A 517 700 - -
Alju06g1727 939 Gene3D - 780 826 - -
Alju06g1727 939 Gene3D Immunoglobulins 405 500 IPR013783 -
Alju06g1727 939 SMART ANK_2a 635 664 IPR002110 GO:0005515
Alju06g1727 939 SMART ANK_2a 674 703 IPR002110 GO:0005515
Alju06g1727 939 MobiDBLite consensus disorder prediction 130 153 - -
Alju06g1727 939 Pfam IQ calmodulin-binding motif 782 800 IPR000048 GO:0005515
Alju06g1727 939 Pfam IQ calmodulin-binding motif 804 824 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1727 Alju-ChrAlju06 28164128 28173202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1727 5 939 CAMTA Transcription Factor Family AT1G67310 50.441 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Alju06g1727 CG-1 3.3e-49 No_clan