Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1688 ATGGAGAAGGAAGAGAAGAAGCTGAGTTTTGTGAGAAATGGTGAGTTAAGATTACCACCTGGGTTTCGATTTCACCCAACAGACGAAGAACTTGTGGTACAATACTTGAAGCGAAAGGTCTTGTCTTATCCATTGCCTGCTTCAATCATCCCTGAGGTTCATGTCTGCAAATCTGATCCTTGGGACTTGCCAGGTGATATGGAACAGGAGAGATATTTCTTTAGTACCAGAGAAGCTAAGTACTCTAATGGAAGCCGATCTAATAGAGCAACACATTCTGGGTATTGGAAAGCCACTGGTTTGGACAAGCAAATCCTGACTTCGAAGGGGAATCTAGTTGTGGGCATGAAGAAGACATTGGTTTTCTACAGAGGCAAGCCTCCTCATGGCTCTAGAACTGACTGGATCATGCACGAATATCGCCTTCATAATATACAGAGCTCTGGGGTGGGGATGCAGAACTGGGTGCTGTGTCGCATATTCGTGAAGAGAAGAAGCACAAACGGGAAAAGTGAGGAACAGAGTAGTTTCAGAGTAAGGAGGGATATTATGAACAGTCACTACAAGTCAAGGCCTGTTTTTTATGACTTCTTAGCACAGAGCAAGAACAATAATAACAATATTAATAATACTGATTTGAATCGCACACCTTCGTCTTCAGCCTCAAGCATAAGTGGAATCACTCATCTATCTTCTCACGAATCTGATGAGCGTGGTGAAGAAAGCAGTAGTTGCAACAGCTTGCCGTCTCTTGCAAGAAACCCGTGA 768 0.4349 MEKEEKKLSFVRNGELRLPPGFRFHPTDEELVVQYLKRKVLSYPLPASIIPEVHVCKSDPWDLPGDMEQERYFFSTREAKYSNGSRSNRATHSGYWKATGLDKQILTSKGNLVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLHNIQSSGVGMQNWVLCRIFVKRRSTNGKSEEQSSFRVRRDIMNSHYKSRPVFYDFLAQSKNNNNNINNTDLNRTPSSSASSISGITHLSSHESDERGEESSSCNSLPSLARNP 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1688 255 Gene3D NAC domain 27 168 IPR036093 GO:0003677|GO:0006355
Alju06g1688 255 Pfam No apical meristem (NAM) protein 19 142 IPR003441 GO:0003677|GO:0006355
Alju06g1688 255 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 222 - -
Alju06g1688 255 SUPERFAMILY NAC domain 12 163 IPR036093 GO:0003677|GO:0006355
Alju06g1688 255 MobiDBLite consensus disorder prediction 206 230 - -
Alju06g1688 255 ProSiteProfiles NAC domain profile. 18 163 IPR003441 GO:0003677|GO:0006355
Alju06g1688 255 MobiDBLite consensus disorder prediction 206 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1688 Alju-ChrAlju06 26553763 26554913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1688 8 248 NAC Transcription Factor Family AT5G13180 58.140 2.55e-98 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju06g1688 NAM 5.6e-36 No_clan