Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1675 ATGGTTACCCCCAAATCGCAGGGCCCTGAGAGCGTTCCTTGCGATTTCTGTACACAACAAACAGCAATTCTGTACTGCCGAGCTGACTCGGCCAAGCTCTGTTTATTCTGCGATCAACACGTTCATTCTGCTAACTTGCTCTCTCGCAAGCACTTGCGCTCTCAGATCTGCGATAATTGCACCTCCGAGCCCGTCGCCGTCCGATGTAACACCGACAATCTTGTTCTCTGCCAAGACTGCGATTGGGACGCTCACGCCTCCTCCTCCGTCGCCGCCTCTCACCATCGTACCCCTATTGAGGGTTTCACTGGGTGTCCCTCTGCATCTGAACTCGCTTCGCTTTGGGGGTTTCATTTTGAGAGTAAGACTTTAGATCAATCTCCTTCTTCTTCTTGTTTGATTCAAAACTTGGCTGATTATCGGGATTTGTATGCGCCGCTTGAGTCCTGCCTGTTTAAATCCGATGGCGTTCCTTTTCAAGTTCATGACCTCATGGTTCCAAGGGAAACCGGTATGCTTTGCCTGTCTCCGGATTTCCAGGCGGCGGCCGCGGCCTGTAACGCTACAAAGAAACAGACTCTTTACTGTGGGAAGCAGAAACAGGTTATACACAAGCAGTTGGTTGAATTGCTCAAGAGGGATTCTGTGGTTGTTGATGTTGGCAGTGGTGGTGCTGAAGTTGACGGTGGCCGCAGCGGTGGTGGTGGTGCTATTCTAGCAAGGCTAAGTGCTGCTAATGAGGCTGAGAATTTGGTTCCTGAAGCGCCGAGGAAGAGCCCTGGATATGGCCGGCAACCATTTGTTATGGGAAATGAGGTTCAAGGATTTACGGCGATTACTGCTTCGCACCAACAACCATTGCAGCAACAAGCACCAGTTAGTTCTCCGTTTATGATGCCTTCGCAGTTGCATCATAATGAAGGCGATAGATTGTGGCATAATAATTGCGGCAAGCACTCTGTCCAGGTTGAATTGCTTTGGGACCTAATGTTTCACATAGTGGACTCATTTAAAATATGGGATTTCAATTCAGGACGACTAAGGGATCGGGAAGAGTCAAGGGCACTTGAAGCAGCCTATTTAGCAAGTGATGGTGGATTTTTAGCCAAGAATTTTAGTGAACTTATCAGAGAATCATCCATGACCGACACTAAATTGTTACAAGATATATATGATATGAATATCGCATATGATGATATGGCGGCATCATATAACAACCTGTCAAATAACCCAACAACAACATCAGAGAGCAACAACCTACCAACAAGAAAGCAATCTGGAAATAATGCAGCTGCTGGTCCTGGGAAGCACCAAGGTGACAACATGGTAAAAGCGGGACGAAGCAAGGCTGACATGGACCTGTTGGCCCAAAACAGGGGCACCGCAATGCTCCGTTACAAGGAGAAAAAGAAAACTCGAAGGTACGAGAAGCACATAAGATATGAGGCTAGGAAGATGAGAGCTGACACTCGGAAACGAGTTAAAGGCCGATTTGTAAAGGCTAGTGACGTGGCCGAACATCCTAATGGTTAA 1533 0.4762 MVTPKSQGPESVPCDFCTQQTAILYCRADSAKLCLFCDQHVHSANLLSRKHLRSQICDNCTSEPVAVRCNTDNLVLCQDCDWDAHASSSVAASHHRTPIEGFTGCPSASELASLWGFHFESKTLDQSPSSSCLIQNLADYRDLYAPLESCLFKSDGVPFQVHDLMVPRETGMLCLSPDFQAAAAACNATKKQTLYCGKQKQVIHKQLVELLKRDSVVVDVGSGGAEVDGGRSGGGGAILARLSAANEAENLVPEAPRKSPGYGRQPFVMGNEVQGFTAITASHQQPLQQQAPVSSPFMMPSQLHHNEGDRLWHNNCGKHSVQVELLWDLMFHIVDSFKIWDFNSGRLRDREESRALEAAYLASDGGFLAKNFSELIRESSMTDTKLLQDIYDMNIAYDDMAASYNNLSNNPTTTSESNNLPTRKQSGNNAAAGPGKHQGDNMVKAGRSKADMDLLAQNRGTAMLRYKEKKKTRRYEKHIRYEARKMRADTRKRVKGRFVKASDVAEHPNG 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1675 510 CDD Bbox1_BBX-like 13 56 - -
Alju06g1675 510 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 13 502 - -
Alju06g1675 510 MobiDBLite consensus disorder prediction 407 432 - -
Alju06g1675 510 Pfam CCT motif 459 501 IPR010402 GO:0005515
Alju06g1675 510 MobiDBLite consensus disorder prediction 407 441 - -
Alju06g1675 510 SMART bboxneu5 9 56 IPR000315 GO:0008270
Alju06g1675 510 SMART bboxneu5 57 99 IPR000315 GO:0008270
Alju06g1675 510 ProSiteProfiles CCT domain profile. 459 501 IPR010402 GO:0005515
Alju06g1675 510 ProSiteProfiles Zinc finger B-box type profile. 9 56 IPR000315 GO:0008270
Alju06g1675 510 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Alju06g1675 510 Pfam B-box zinc finger 55 98 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1675 Alju-ChrAlju06 25809598 25812518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1675 12 503 C2C2-CO-like Transcription Factor Family AT2G33500 35.458 2.99e-82 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Alju06g1675 zf-B_box 8.7e-06 No_clan