Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1673 ATGGCCTTGGAGCAGCAATTATCACTGGGTCCTAATCCGAATCCCGTTGACGGCCAAACTGACGGAACCACTAACGGCGTTGATTTCCGGCAGCCGTCCACCGACGCCGGAGAGGATGGCGTCAAGGCGCCGAGGCTGCCTCGCTGGACGAGACAGGAGATTCTGGTGCTGATACATGGCAAGAGGGATGCGGAGAATCAAATTCGAGGGAGTCGTAGTGCGGGTTTGCCATTTGGGACAGGCCAGCTTGAGCCGAAATGGGCTTCGGTATCATCGTACTGCAAAAAGCATGGAGTGAATAGAGGTCCGGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCTGGGGACTATAAGAAGATCAAGGAATGGGAATCTCAGATAAGGGACGATTCGGAATCGTTTTGGGTGATGAGAAACGATTTAAGGAGAGAGAAGAAATTGCCGGGATTTTTCGATAAGGAAGTCTATGACATTCTCGATTCCGGATCGCAGGCGCCGGCGTTATCTTTAGCTCTGGCATCGCCTCCCGCAACTGGAACTGTTCCGGTGGAAAAGAGGAAAGACAGTGGGGGAGTGGCGGCAGAGACAGCGGAGGCTGATACTGAGCCACACTTGTATGATAGTCGGAGCGCTGCCGGAGAGGATGGCTTGTTCTCGGATTTCGAACAGGAAGAGGCAGGATTGAGTCCAGAAAAGGAAGCAGTGAGGAAAGATGTCTCAACACATACAACGCCTGTTCCTGCACCTATCCCAATCTCAGAGAAGCAATATCAACCACTTCTGCGTGGCTGTCAAGGTGAAGGAAATGCTCAAGGTGGGAGCAACGAGAAACAGCGAGGCCCGAATCCAGAAACAGGTTCTACATCTCAAGGAGGTCGGAAGAGGAAGCGGTTTCCAACAACGGATGAGGAGGATGAAATTCTGCAAAATCAATTGATCGATGTGCTGGAAAGAAATGGGAAGATGCTGAGCGCCCAGCTCGAAGCCCAGAACCTAAATTTCCACTTGGACAGGGAGCAGCGGAAAGACCATGCCAGTCACTTAGTTGCTGTTCTTGATAAGCTTGCAGATGCTTTAGGCAGAATTGCTGATAAATTATAG 1101 0.5123 MALEQQLSLGPNPNPVDGQTDGTTNGVDFRQPSTDAGEDGVKAPRLPRWTRQEILVLIHGKRDAENQIRGSRSAGLPFGTGQLEPKWASVSSYCKKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIRDDSESFWVMRNDLRREKKLPGFFDKEVYDILDSGSQAPALSLALASPPATGTVPVEKRKDSGGVAAETAEADTEPHLYDSRSAAGEDGLFSDFEQEEAGLSPEKEAVRKDVSTHTTPVPAPIPISEKQYQPLLRGCQGEGNAQGGSNEKQRGPNPETGSTSQGGRKRKRFPTTDEEDEILQNQLIDVLERNGKMLSAQLEAQNLNFHLDREQRKDHASHLVAVLDKLADALGRIADKL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1673 366 Gene3D - 49 119 - -
Alju06g1673 366 ProSiteProfiles Myb-like domain profile. 48 114 IPR001005 -
Alju06g1673 366 MobiDBLite consensus disorder prediction 174 305 - -
Alju06g1673 366 MobiDBLite consensus disorder prediction 1 31 - -
Alju06g1673 366 Pfam Myb/SANT-like DNA-binding domain 48 137 IPR044822 -
Alju06g1673 366 MobiDBLite consensus disorder prediction 268 294 - -
Alju06g1673 366 MobiDBLite consensus disorder prediction 1 45 - -
Alju06g1673 366 MobiDBLite consensus disorder prediction 225 239 - -
Alju06g1673 366 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 23 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1673 Alju-ChrAlju06 25322104 25325001 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1673 48 192 Trihelix Transcription Factor Family AT1G33240 26.531 6.42e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju06g1673 Myb_DNA-bind_4 9.6e-12 CL0123