LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju06g1656	ATGACCATGCTTCCGGCAACTCATCACGAATTGTCATCAAAACAAGATCATCATCAACAACAACAACTGAGTTATGGTGGATTTGGCGGTGGTGGAACAACTGTTATGAGCAGACTTGAAGTTGAAGGGTATTATTATAATAATAATCAGAATATTTGCAGGGAATCTGATCAGTTAATATTAGGATCGGACATGGGTGAGGATGATCAATCCAGAAGTAACAATAGCGCTAGTGTTGGTGGTAGCTCGAAAGGGAATAATAATCATCAGATTATTAATAATCAGCATCAGGAGGATCAGCAAGAGAAGGATCAAGGATGGCTTCAATTAAGCATAGGACGTCAAAGAGAAGGTGACCAATTAGGTGTTTCTTCTTCACCAGTGGAGCTAGACCTTCTTCCCCATTCGAGTTCCGAGCCGTGCAGACCGTTCCTCCTGCCGCCGCCACCAGCAGCCCCTCAGCTCGGTGGTGGTTCCGTCGCGGCTCCGCTCTTGAATTTCAGCTACACACAACCACAGCCTCCTCAGCCACCGCCTCCTCCTCCTCCTCCACCCTCGAATCTTCTTTTTCAACAGCTTCAATATCCTCCAAGTGTTTCAGGCTTTGCTCCTCATCATCATTCACAGTACTCTAACTGGGCATTCGCTCCTTTCACCATGCCTTCCTCTTCCTCTTCTTCTTCTTTTCCTTTGAGCTCTCATCATCTTGCTGCTTCCTATTTTCCGAGGCCCTTTCACTTCCCTCCCGGCTTTCATGATGATGCTTCAGCTGGTCCCAGCTCCGATTTTAGAGTCGTCGATCCTCCTCGCCGGCCTCATTCCGGAATTTGGTTCATGCTCCAAGCCTCCCCAAATCAAGCTAAAGAACCGTTCTTGCCCCAAATACCCAAGAGCTACCTCAGAATCAAGGATGGAAGGATGACGGTACGATTATTGTTGAAGTATTTGGTTAACAAGTTGAGGCTACAAAGCGAATCTGAGATAGAGATAAGATGTAGAGGGCAACAACTTGGGCCATTGTTGACGTTGGAGGATGTAAGAGATAATATTTGGAGTCCCATAACGACGCCCACTTTGCTTTCAGATTCCTCAACCAATGATCATATCATGGTCCTCTACTACGGTAGATGTGCTTAA	1137	0.4635	MTMLPATHHELSSKQDHHQQQQLSYGGFGGGGTTVMSRLEVEGYYYNNNQNICRESDQLILGSDMGEDDQSRSNNSASVGGSSKGNNNHQIINNQHQEDQQEKDQGWLQLSIGRQREGDQLGVSSSPVELDLLPHSSSEPCRPFLLPPPPAAPQLGGGSVAAPLLNFSYTQPQPPQPPPPPPPPPSNLLFQQLQYPPSVSGFAPHHHSQYSNWAFAPFTMPSSSSSSSFPLSSHHLAASYFPRPFHFPPGFHDDASAGPSSDFRVVDPPRRPHSGIWFMLQASPNQAKEPFLPQIPKSYLRIKDGRMTVRLLLKYLVNKLRLQSESEIEIRCRGQQLGPLLTLEDVRDNIWSPITTPTLLSDSSTNDHIMVLYYGRCA	378

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju06g1656	378	MobiDBLite	consensus disorder prediction	170	190	-	-
	Alju06g1656	378	Gene3D	-	270	361	-	-
	Alju06g1656	378	PANTHER	RING FINGER PROTEIN	1	377	IPR044171	GO:0007275
	Alju06g1656	378	MobiDBLite	consensus disorder prediction	1	27	-	-
	Alju06g1656	378	MobiDBLite	consensus disorder prediction	67	90	-	-
	Alju06g1656	378	MobiDBLite	consensus disorder prediction	63	90	-	-
	Alju06g1656	378	MobiDBLite	consensus disorder prediction	165	191	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju06g1656	Alju-ChrAlju06	23717435	23726752	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju06g1656	289	375	C3H Transcription Factor Family	AT3G23060	40.217	6.28e-09	55.5