Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1652 ATGGTTTCCAAAAGATACAGTTCCTCATATTACACAAAGGAGTTCTTAGCTTTACTCTTGCTGTTCTTATTTAGCTTCCAGAACAGCACTGTTGAGTGCCAGGGAAGGTTAAATAAACAGAACTATTCAGAATCAGAAACTAAGTATCAATCAAGGCCTTCACAAGACAAGGAAGACTTGCGCAAGATTATCATAAGTGTTGTTCTGGGATCAGTCACTGGATTAGTTTGCTCCGTTTTGTTTGCTCTTATAGTACGTTGCTTTGTTCAGTATCTGAACCAAACCCCAATACTGAAGGGGCCTGTCATATTTTCCCCCAAAATTTCTCCCAAGACACTCCAATCAGCTTTGGCAAAAGAAAACCATTTACTTGGTTCAAGCCTAAATGGTAGATGTTACAGAACAGTGCTTGACAATGGGCTCACTATTGCAGTGAAGAGGCTAACACCCTTTGAACCCGGATCGCCAGAGATTAGGAAAAAGAGGGTTAAGAGAGAAATACAGAAGGAGCTGGAAGTGCTTGCTAGCCCAAGACATAGGAATTTGATGAGCTTAAGGGCTTACGTTCGTGAACCTGATAGTTTTTCCTTGGTTTATGATTATGTAGCCAAGGGCAGCCTTGCTGATGCAATGAATAGAGCTAAGGAAAGCGAGTTGCCGCCTCTTAGTTGGGAAATTAGGCTGAGGATTGCAATTGGGTTGGCTAAGGGGCTTCAGTATCTTCATTCTACTTGTGTGCCTCAGATTCTGCACTACAACCTTAAGCCCTCCAATGTGATGTTGGATGCTGAGTTTGAACCTAGGTTGTCTGATTATGGATTGATTAAGCTTCTACCCAACTTGAGTAGAGCCACATCTCCCTACACTCCTCCTGAATGCTTGCATAATTGCAGCAGGTACAGTGAGAAAAGTGACATATTCAGTTTTGGGATGATCTTGGGTGTATTATTAACAGGAAGGGACCCCAGAGATGCGTTCTTTGAAGAAGCAGGGAATGGAGGGAGCATGGGGTGTTGGCTCAGGCAGTTGCAGCAAGCAGGAGACGCCAAGGAAGCGCTTGATAAGAACCTCGTTGCTGTGAGGGAAGGGGACGAAGATGATATGCTCATGGCCGTCAGGGTGGCCGCGGCGTGCCTCTCCGATGTGCCTGCAGATAGGCCTTCCAGTGATGAACTTGTTCACATGCTAACGCAACTTCACAGTTTTTGA 1209 0.4491 MVSKRYSSSYYTKEFLALLLLFLFSFQNSTVECQGRLNKQNYSESETKYQSRPSQDKEDLRKIIISVVLGSVTGLVCSVLFALIVRCFVQYLNQTPILKGPVIFSPKISPKTLQSALAKENHLLGSSLNGRCYRTVLDNGLTIAVKRLTPFEPGSPEIRKKRVKREIQKELEVLASPRHRNLMSLRAYVREPDSFSLVYDYVAKGSLADAMNRAKESELPPLSWEIRLRIAIGLAKGLQYLHSTCVPQILHYNLKPSNVMLDAEFEPRLSDYGLIKLLPNLSRATSPYTPPECLHNCSRYSEKSDIFSFGMILGVLLTGRDPRDAFFEEAGNGGSMGCWLRQLQQAGDAKEALDKNLVAVREGDEDDMLMAVRVAAACLSDVPADRPSSDELVHMLTQLHSF 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1652 402 Gene3D Phosphorylase Kinase; domain 1 105 201 - -
Alju06g1652 402 ProSiteProfiles Protein kinase domain profile. 118 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1652 402 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 110 201 - -
Alju06g1652 402 CDD STKc_IRAK 124 399 - -
Alju06g1652 402 SUPERFAMILY Protein kinase-like (PK-like) 121 396 IPR011009 -
Alju06g1652 402 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 27 398 - -
Alju06g1652 402 Gene3D Transferase(Phosphotransferase) domain 1 202 401 - -
Alju06g1652 402 Pfam Protein kinase domain 120 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1652 Alju-ChrAlju06 23142257 23144225 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1652 64 399 Receptor kinase-like Gene Family AT2G31880 32.493 8.52e-56 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Alju06g1652 Pkinase 5.7e-31 CL0016