Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1628 ATGGGGTCCTATGAACAGCCATCAGCAGGCGGCGGCGCCTCCTCCAATGGTAGCTCCTCCAGCTCTGGAACCAGGCCGGCAGAGATGGACGGTCTCCTAGCTGGCGCCGGTTACAAGGTCAAGGCGGCGGAGCTCCATCAAGTGGCTCGGCGTATAGAGCGGCTCGATAATGTCATGGTCAACTCCGCCGCGGACTTTTCTCATCTAGCTTCCGATACGGTACACTACGACCCCGCCGATATCGGCTCTTGGGTTGACACTCTGCTCACTGAATTGAACCAGACCGTTTCTCTGCCGTGTGATCTGTTGGAGTTGCCGGATCTCCCAACTTGTCCGTTGCTTGATGAAACGACGGCGCTTGATAATCGGGGGGTGGTGGGTCAGAATGATCAGAGCCACCATAGCTTCACTCCTCAGCAGCAGCAATTTCAGCAATTGACGGTGGTAACATCGATGGAAGAGAACTCCGGGATAAGGCTGGTCCACATGTTGATGACCTGTGCGGATTCTCTTCAACGTGGCGAGCTAGCTCTTGCCGGCTCGTTTATTGAGGACATGCAGGGTTTGTTGGCGCACGTGAACACCAGCTTTGGCATCGGAAAAGTCGCCGGATACTTCATCGATGCCCTCAGCCGCCGGATCTTCGCGGCAAGGACCATCGGCACTGGCTCCTCCTGCACCGGCTCGCCTTATGAGGATGTGGTTTTGTACCATCACTATTACGAGACTTGCCCTTACCTCAAGTTCGCTCACTTCACGGCGAACCAAGCCATCTTGGAAGCCTTCAACGGCCACGATTGCGTCCACGTCATCGACTTCAATCTCATGCACGGCCTCCAGTGGCCAGCCTTGATTCAAGCTCTGGCTCTCCGTCCTGGTGGGGCCCCCTTACTGAGGTTGACCGGCATTGGCCCGCCGTCTCCGGACGGCCGTGACACTCTCCGCGAAATTGGACTGAAACTCGCCGAGTTAGCTCGGTCTGTCAACGTCCGATTCGCTTTCCGTGGAGTGGCGGCTTCCAGACTTGAAGACGTCAAGCCATGGATGCTCCAGGTAAGCCCAAAAGAAGCTGTGGCGGTGAATTCCATCATGCAGCTTCACCGCCTCCTAGGATCCGACCCGACAAGAGAACCCGCAATCCAATCCGTCCTTACCTGGATCCGAAGCTTGAACCCCAAAATCATGACGGTGGTGGAGCAAGAAGCGAATCATAACCAACCCCGGTTCTTAGACCGGTTCGCGGAAGCTCTGTATTACTACTCCACCATGTTTGACTCGCTTGAGGCTTGCTCACTTCAGCCGGATAAAGCCTTAGCCGAGATATACATACAGAAGGAGATATGCAACGTGGTGTGCTGTGAGGGATCGGCTCGCTTGGAGCGGCACGAGCCGCTGGCTAAGTGGAGAGATCGGCTCACTGAAGCCGGCTTTAGGGCTCTACACTTGGGATCAAATGCCTTCAAGCAAGCCAGCATGCTTTTGACTCTGTTCTCAGCTGAAGGTTATTGTGTGGAAGAGAACGAAGGATGTTTGACTTTGGGTTGGCATAGCCGACCCCTCATTGCGGCTTCGGCTTGGCAAGCCGCGCCAGAGTATGAAGCGACTTAA 1608 0.5547 MGSYEQPSAGGGASSNGSSSSSGTRPAEMDGLLAGAGYKVKAAELHQVARRIERLDNVMVNSAADFSHLASDTVHYDPADIGSWVDTLLTELNQTVSLPCDLLELPDLPTCPLLDETTALDNRGVVGQNDQSHHSFTPQQQQFQQLTVVTSMEENSGIRLVHMLMTCADSLQRGELALAGSFIEDMQGLLAHVNTSFGIGKVAGYFIDALSRRIFAARTIGTGSSCTGSPYEDVVLYHHYYETCPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMHGLQWPALIQALALRPGGAPLLRLTGIGPPSPDGRDTLREIGLKLAELARSVNVRFAFRGVAASRLEDVKPWMLQVSPKEAVAVNSIMQLHRLLGSDPTREPAIQSVLTWIRSLNPKIMTVVEQEANHNQPRFLDRFAEALYYYSTMFDSLEACSLQPDKALAEIYIQKEICNVVCCEGSARLERHEPLAKWRDRLTEAGFRALHLGSNAFKQASMLLTLFSAEGYCVEENEGCLTLGWHSRPLIAASAWQAAPEYEAT 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1628 535 MobiDBLite consensus disorder prediction 1 26 - -
Alju06g1628 535 Gene3D - 28 92 IPR038088 -
Alju06g1628 535 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 145 523 IPR005202 -
Alju06g1628 535 ProSiteProfiles GRAS family profile. 151 527 IPR005202 -
Alju06g1628 535 SMART DELLA_2 30 102 - -
Alju06g1628 535 MobiDBLite consensus disorder prediction 1 28 - -
Alju06g1628 535 Pfam GRAS domain family 160 527 IPR005202 -
Alju06g1628 535 Pfam Transcriptional regulator DELLA protein N terminal 30 95 IPR021914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1628 Alju-ChrAlju06 22199011 22200618 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1628 29 527 GRAS Transcription Factor Family AT1G14920 48.842 1.79e-162 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju06g1628 GRAS 5.6e-125 CL0063