Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1623 ATGGGGGTGGTTTTTGATGCTGGGCCTGTGATGATGATGATGATGATTCTTGTTCTGTTTGTTCTGCTGCAACTGAGTTGGCGAGTTAACTCGGAGCCGACTCAGGACAAGGAAGCCCTACTTGCCTTCATCTCCAGAACTCCTCACGCGAATCGCCTCCAGTGGAACGATTCCGACTCGGCCTGCGACTGGATTGGAGTTCAATGTGACTCGTCGCGTTCTTTTGTGTATTCTCTTCGTCTTCCCGGCGTCGACCTTGTTGGTCCCATTCCGCCTGACACCATCGGCCGGCTCACTCGCCTCCGCGTGCTCAGTCTCCGGTCTAACGGCCTCTCCGGCGAGATTCCCTCGGATTTCTTGAATTTGACCTTGCTTCGTAGTCTCTACCTCCATGGCAACAAGCTCTCGGGCGAGTTTCCCGCCACGGTGACTCGGTTGACTCGTTTGGCGCGTCTGGACCTTTCGTACAACAACTTCACGGGTTCAATTCCTTTCTCCATCAACAATTTGACCCGCCTGACTGGTCTTTTCTTGGAAAACAATAGATTCTCTGGGAATCTTCCAAGCATTACCGCCAAATTGGTGAGCTTCAATGTTTCCCATAATCAGCTCAATGGTTCAATCCCCGAAACCCTCTCGAAATTCCCCGAATCCTCATTTGCCGGAAACCTCGCTCTTTGTGGAGCCCCTTTACAATCGTGTAACCCATTCTTTCCGGCGCCGGCTCCTTCCGCCGTCGTACCTTCGATTCCAGTTCACGTAAGAAACTCCAAGAAGCTCTCCACTGGAGCCATCATTGGAATTTCAGTTGGCTGTGGTCTTGCTTTCTTACTACTATTGTTCCTTCTCTTGCTCTGCCTCCGCAGGCGCGGGCGTCAGCAACCTTCGAAGACGCCGAAGCCGGTGGCAACTGAAACACGGGCTGCTCCGGCGGTGGAGGCGGGAACTTCATCGTCGAAAGACGATGTAACAGGTGGGTCTGCTGAGGCAGCAGAGAGGAACAAATTAGTTTTCTTCGAAGGTGGGATTTATAGTTTCGATTTGGAAGATTTGCTTCGAGCTTCAGCGGAAGTTCTGGGGAAGGGAACCGTCGGTACGTCGTATAAGGCGGTGCTGGAGGAGGGAACGACGGTGGTGGTGAAGAGGCTGAAGGACGTGGCGGTGGTGAAGAAGGAGTTCGAAACACAAATGGAGATTCTGGGGAAGATTAAGCATCAAAATGTGGTTCCTCTCAGAGCATTTTACTTCTCCAAAGATGAGAAATTGCTCGTCTACGATTACTTGCCCGCCGGTGGCGTGGCTGCTCTGCTTCACGGGAGTAGAGGGTCAGGGAGACCCCCACTGGACTGGGATAGCCGAATAAGAATAGCTATAGGAGCTGCAAGAGGGTTGGCCCACTTACACGTGTCAGCAAATGTGGTCCACGGCAACATAAAATCTTCCAACATCCTCCTCCGAGACGACCACGAGGCTTGCGTTTCGGACTTCGGGCTGAACCCGCTTTTCGGATCAATCCTCCCATCCAATCGGATCGGAGGTTATCGGGCACCCGAGGTCGTCGAAACCCGAAAAACGACGTTCCAATCCGATGTATACAGTTTCGGAGTACTGTTGCTGGAGCTCCTAACCGGTAAGGCTCCGAACCAAGCGACGCTGGGCGAGGAAGGCATCGACCTTCCGAGGTGGGTCCAGTCGGTGGTTCGGGAGGAATGGACCGCCGAAGTGTTCGACGCCGAGCTGACGAGGCAGCTCAACGTCGAGGAAGAGATGGTTCAGCTCTTGCAAATAGCGATGGCTTGTGTCTCCGTCGTGCCGGATCAGAGACCCGCCATGCCGGTTGTGGTTCGTATGATCGAGGATATGAACCGTGGCGGGACTGACGAGGCCTTACGACAGTCTTTCGATGATCCCTCCAAAGGCTCCGACGGGCAAACGCCGCCCCCTGAGGCGCGGACTACAACATCGTAA 1968 0.5396 MGVVFDAGPVMMMMMILVLFVLLQLSWRVNSEPTQDKEALLAFISRTPHANRLQWNDSDSACDWIGVQCDSSRSFVYSLRLPGVDLVGPIPPDTIGRLTRLRVLSLRSNGLSGEIPSDFLNLTLLRSLYLHGNKLSGEFPATVTRLTRLARLDLSYNNFTGSIPFSINNLTRLTGLFLENNRFSGNLPSITAKLVSFNVSHNQLNGSIPETLSKFPESSFAGNLALCGAPLQSCNPFFPAPAPSAVVPSIPVHVRNSKKLSTGAIIGISVGCGLAFLLLLFLLLLCLRRRGRQQPSKTPKPVATETRAAPAVEAGTSSSKDDVTGGSAEAAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGTVGTSYKAVLEEGTTVVVKRLKDVAVVKKEFETQMEILGKIKHQNVVPLRAFYFSKDEKLLVYDYLPAGGVAALLHGSRGSGRPPLDWDSRIRIAIGAARGLAHLHVSANVVHGNIKSSNILLRDDHEACVSDFGLNPLFGSILPSNRIGGYRAPEVVETRKTTFQSDVYSFGVLLLELLTGKAPNQATLGEEGIDLPRWVQSVVREEWTAEVFDAELTRQLNVEEEMVQLLQIAMACVSVVPDQRPAMPVVVRMIEDMNRGGTDEALRQSFDDPSKGSDGQTPPPEARTTTS 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1623 655 Gene3D Ribonuclease Inhibitor 193 237 IPR032675 -
Alju06g1623 655 Pfam Protein kinase domain 356 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1623 655 CDD STKc_IRAK 359 621 - -
Alju06g1623 655 ProSiteProfiles Protein kinase domain profile. 353 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1623 655 FunFam pollen receptor-like kinase 1 323 427 - -
Alju06g1623 655 PANTHER OS05G0588300 PROTEIN 14 631 - -
Alju06g1623 655 MobiDBLite consensus disorder prediction 293 327 - -
Alju06g1623 655 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 428 632 - -
Alju06g1623 655 SUPERFAMILY L domain-like 56 227 - -
Alju06g1623 655 Gene3D Ribonuclease Inhibitor 33 192 IPR032675 -
Alju06g1623 655 FunFam Probable inactive receptor kinase RLK902 33 191 - -
Alju06g1623 655 SUPERFAMILY Protein kinase-like (PK-like) 357 618 IPR011009 -
Alju06g1623 655 MobiDBLite consensus disorder prediction 625 655 - -
Alju06g1623 655 MobiDBLite consensus disorder prediction 637 655 - -
Alju06g1623 655 Pfam Leucine rich repeat 90 135 IPR001611 GO:0005515
Alju06g1623 655 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Alju06g1623 655 Gene3D Phosphorylase Kinase; domain 1 321 427 - -
Alju06g1623 655 Gene3D Transferase(Phosphotransferase) domain 1 429 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1623 Alju-ChrAlju06 21775521 21779830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1623 5 642 Receptor kinase-like Gene Family AT5G58300 51.064 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju06g1623 Pkinase 2.9e-33 CL0016