Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1601 ATGTCGAGCTGCAACATGGACGTTGGTTCTGAGCAACTATGCTATATCCCCTGCAAATTTTGCAACATTGTTCTTGCGGTTAGTGTTCCATGCAGTAGTCTGTTTGACATCGTGACCGTCCGATGTGGTCACTGCACCAATCTATGGTCCGTGAACATGGCCGCCGCATTTCAGTCACTGTCATGGCAACAAGTTCAGGCTTCTGGGTTATCCAACCCAGAGTACAGAATCGAGTCTGGTTCGTCTTCCAGATGCAACAATAGGATTGCAGTGAAAGCCCCCACCACCACACGTAATGCAACTGAGGAAAGAGCTGCAACTAGGCCTCCCGAGAAGAGGCAGCGCGTACCTTCTGCGTACAATCAAGAAGAGATTCAGAGGATCAAAGTCAATAATCCAGATATCAGTCACAGGGAGGCATTCAGTACTGCTGCAAAGAATTGGGCACATTTCCCTCACATTCATTTCGGGTTGATGCTGGAGGCCAATAATAATCAAGCTAGGATTGGAAATGTATAA 519 0.474 MSSCNMDVGSEQLCYIPCKFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQQVQASGLSNPEYRIESGSSSRCNNRIAVKAPTTTRNATEERAATRPPEKRQRVPSAYNQEEIQRIKVNNPDISHREAFSTAAKNWAHFPHIHFGLMLEANNNQARIGNV 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1601 172 MobiDBLite consensus disorder prediction 94 118 - -
Alju06g1601 172 Pfam YABBY protein 10 158 IPR006780 GO:0007275
Alju06g1601 172 PANTHER PROTEIN YABBY 6-RELATED 1 166 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1601 Alju-ChrAlju06 21057709 21061116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1601 5 170 C2C2-YABBY Transcription Factor Family AT2G26580 71.598 4.33e-82 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Alju06g1601 YABBY 1.7e-62 CL0114