Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1591 ATGCAGCAATCTGCAGCCAATCATTGTCGTTATCCTCTTCCTCCTTTCTTTACGCAATATTTCCGTCAGCCCTTGAAGCTGCTCTTAGTGGGCACTGATCATGCTACCCAAACTAGTATTCACACATATCTTCCAACATCTTATTATAAAATCACTGCGTGTGACAGTGGTCTTGGTGCCCTAAGATACTTACGAGGGAAAGGACCTGATTCTTTTGACTTGGTTCTCAGTGATATCGCCTTGAAAGACATAGATGGCTACCAGTTCATCAGAGAGCAACAGTTGAACCCAAATATTGCCCACGTTGCAATATGTGGGGGTGAAAGATCAACTGATGAGATCCTGAAAGCATATAGAAGTGGTGCTTGCAGTGTTTTGTGGAAACCGGTGAGTGAGTTGGGCGATGAGATTGGAAATTTATGGAGACATGTTTGTAGGAGAAGGGAACAGCATGAGAGGACGTCCAAGACTCATGACGCTGAACAACAGAATCAGAATAAGGGTTCTTCTTCTTCTCTATCATCCAAAGACGCAAGTCTGGAAGAAGATGATTACCTTGAGTTTGTGAATCATGGCGGAGAACCTGCTTCGATAAAACGAAGGCGGGTATCCTGGAAGGACATCCATCCGTTATTTGTTAATGCTGTGAATCAACTTGGCGGCCCTGAAAATGCAAAGCCAAGACAGATTATTGAAATAATGAAAGTGCCTGGTCTAACGAGAGCACATGTTGGTAGTCACTTACAGAAATATAGAGAAAGATTAAAGAGAATGGAGGAAGAGCAGCAGCATTACTCAGTTTCTCACATGAATGGATCCCTTTTCACGATGGAACCCCATCTTTATAATTACCACCTTGCTCGCCAGCCAATACAAATGCAAATGCAACCACCTGAACAAAACTTCAACAACTTTGCTTCAGAGTCTTCTTCTTGTGTTAATAATGCTACTAGAATTGCTAATAATGAAGGAATCATAAATAAAAAACAAGCCCTGGGTACTTCATTAGGAAGTAATATGCAGCTGCAACCACAGATTGGCACTAACCTGACTTCTAGTATGCAACATCTAAATCAAAACCCAGCTTCAGGTTCTTCTTATTATGTTGGTAGTACGGGAGGTGATAATAATGATGGAATCATAAATCAAAAACAAGCCCCGGGTACTTCATTTGGAAGTAATATGCAGCAGCAGCCACATACTGATACTTCCTTTGGGAGTATAACTTATGGTGTGGAACAACCTGATCAAGACCCATCTTCAGGTTCTACTTCTTATGTTAGTACTGCTAGAGGTGCTAATAATGATGTAACCATAAATCAAAATCAAGCCATTTCCTTTAAAAGTAAAATGCTGCAGCAACCACAAATATCAAAAGATCAAAATCTAGAAGCAGGCGGTCATGATGGAATCATCAATCCAGAAGCAGGTGGTCTTGGTGGAATCATCAATCCAGAAGCAACACATGTTACCAAGGATCATGGGGAATTTGACTTCTTGAATACGCAATCATTTCAAGACCTGGAAAATTTTTTTTGA 1539 0.4087 MQQSAANHCRYPLPPFFTQYFRQPLKLLLVGTDHATQTSIHTYLPTSYYKITACDSGLGALRYLRGKGPDSFDLVLSDIALKDIDGYQFIREQQLNPNIAHVAICGGERSTDEILKAYRSGACSVLWKPVSELGDEIGNLWRHVCRRREQHERTSKTHDAEQQNQNKGSSSSLSSKDASLEEDDYLEFVNHGGEPASIKRRRVSWKDIHPLFVNAVNQLGGPENAKPRQIIEIMKVPGLTRAHVGSHLQKYRERLKRMEEEQQHYSVSHMNGSLFTMEPHLYNYHLARQPIQMQMQPPEQNFNNFASESSSCVNNATRIANNEGIINKKQALGTSLGSNMQLQPQIGTNLTSSMQHLNQNPASGSSYYVGSTGGDNNDGIINQKQAPGTSFGSNMQQQPHTDTSFGSITYGVEQPDQDPSSGSTSYVSTARGANNDVTINQNQAISFKSKMLQQPQISKDQNLEAGGHDGIINPEAGGLGGIINPEATHVTKDHGEFDFLNTQSFQDLENFF 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1591 512 Gene3D - 197 259 - -
Alju06g1591 512 Coils Coil 241 268 - -
Alju06g1591 512 MobiDBLite consensus disorder prediction 354 429 - -
Alju06g1591 512 Gene3D - 26 178 - -
Alju06g1591 512 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 151 446 IPR044841 GO:0003700|GO:0006355
Alju06g1591 512 NCBIfam myb-like DNA-binding domain, SHAQKYF class 201 254 IPR006447 GO:0003677
Alju06g1591 512 FunFam Two-component response regulator 196 259 - -
Alju06g1591 512 SUPERFAMILY CheY-like 23 153 IPR011006 -
Alju06g1591 512 SUPERFAMILY Homeodomain-like 198 257 IPR009057 -
Alju06g1591 512 ProSiteProfiles Response regulatory domain profile. 26 143 IPR001789 GO:0000160
Alju06g1591 512 MobiDBLite consensus disorder prediction 152 176 - -
Alju06g1591 512 MobiDBLite consensus disorder prediction 161 176 - -
Alju06g1591 512 SMART REC_2 25 137 IPR001789 GO:0000160
Alju06g1591 512 Pfam Response regulator receiver domain 28 131 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1591 Alju-ChrAlju06 20610094 20612484 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1591 25 258 Response Regulator Gene Family AT2G25180 31.818 2.41e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju06g1591 Response_reg 2e-10 CL0304