Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1589 ATGCAGCAATCTGCAGCCAATCATTGTCGTTATCCTCTTCCTCCTTTCTTTACGCAATATTTCCGTCAGCCCTTGAAGCTGCTCTTAGTGGGCACTGATCATGCTACCCAAACTAGTATTCACACATATCTTCCAACATCTTATTATAAAATCACTGCGTGTGACAGTGGTCTTGGTGCCCTAAGATACTTACGAGGGAAAGGACCTGATTCTTTTGACTTGGTTCTCAGTGATATCGCCTTGAAAGACATAGATGGCTACCAGTTCATCAGAGAGCAACAGTTGAACCCAAATATTGCCCACGTTGCAATATGTGGGGGTGAAAGATCAACTGATGAGATCCTGAAAGCATATAGAAGTGGTGCTTGCAGTGTTTTGTGGAAACCGGTGAGTGAGTTGGGCGATGAGATTGGAAATTTATGGAGACATGTTTGTAGGAGAAGGGAACAGCATGAGAGGACGTCCAAGACTCATGACGCTGAACAACAGAATCAGAATAAGGGTTCTTCTTCTTCTCTATCATCCAAAGACGCAAGTCTGGAAGAAGATGATTACCTTGAGTTTGTGAATCATGGCGGAGAACCTGCTTCGATAAAACGAAGGCGGGTATCCTGGAAGGACATCCATCCGTTATTTGTTAATGCTGTGAATCAACTTGGCGGCCCTGAAAATGCAAAGCCAAGACAGATTATTGAAATAATGAAAGTGCCTGGTCTAACGAGAGCACATGTTGGTAGTCACTTACAGAAATATAGAGAAAGATTAAAGAGAATGGAGGAAGAGCAGCAGCATTACTCAGTTTCTCACATGAATGGATCCCTTTTCACGATGGAACCCCATCTTTATAATTACTCAGATTATTGA 864 0.4271 MQQSAANHCRYPLPPFFTQYFRQPLKLLLVGTDHATQTSIHTYLPTSYYKITACDSGLGALRYLRGKGPDSFDLVLSDIALKDIDGYQFIREQQLNPNIAHVAICGGERSTDEILKAYRSGACSVLWKPVSELGDEIGNLWRHVCRRREQHERTSKTHDAEQQNQNKGSSSSLSSKDASLEEDDYLEFVNHGGEPASIKRRRVSWKDIHPLFVNAVNQLGGPENAKPRQIIEIMKVPGLTRAHVGSHLQKYRERLKRMEEEQQHYSVSHMNGSLFTMEPHLYNYSDY 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1589 287 Coils Coil 241 268 - -
Alju06g1589 287 NCBIfam myb-like DNA-binding domain, SHAQKYF class 201 254 IPR006447 GO:0003677
Alju06g1589 287 FunFam Two-component response regulator 196 259 - -
Alju06g1589 287 SUPERFAMILY Homeodomain-like 198 257 IPR009057 -
Alju06g1589 287 Pfam Response regulator receiver domain 28 131 IPR001789 GO:0000160
Alju06g1589 287 SUPERFAMILY CheY-like 23 153 IPR011006 -
Alju06g1589 287 Gene3D - 197 259 - -
Alju06g1589 287 ProSiteProfiles Response regulatory domain profile. 26 143 IPR001789 GO:0000160
Alju06g1589 287 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 251 IPR045279 GO:0009736
Alju06g1589 287 MobiDBLite consensus disorder prediction 152 176 - -
Alju06g1589 287 MobiDBLite consensus disorder prediction 161 176 - -
Alju06g1589 287 Gene3D - 26 178 - -
Alju06g1589 287 SMART REC_2 25 137 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1589 Alju-ChrAlju06 20593981 20595189 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1589 60 276 Response Regulator Gene Family AT3G16857 35.178 2.54e-27 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju06g1589 Response_reg 6.7e-11 CL0304