Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1588 ATGCAGGAATCTGCAGCCAATCATTGTCGTTATCTTCCTCCTTTCTTTAGTCAATATTTCCGTCAGCCCTTGAAGCTGCTCTTAGTGGGCACTGATCATGCTACCCAAACTAGTATTCAGACGTATCTTCCAACATCTTATTATAAAATCACTGCGTGTGACAGTGGTCTTGGTGCCCTAAGATACTTACGAGAGAAAGGACCTGATTCTTTTGACTTGGTTCTCAGTGATATCGCCTTGAAAGACATAGATGGCTACCAGTTCATCAGAGAGCAACAGTTGAACCCAAATATTGCCCACGTTGCAATATGTGGGGGTGAAAGATCAACTGATGAGATCCTGACAGCATATAGAAGTGGTGCTTGCAGTGTTTTGTGGAAACCAGTGAGTGAGTTGGGCGATGAGATTGGAAATTTATGGAGACATGTTTGTAGGAGGAGGGAACAGCATGAGAGGACGTCCAAGACTCATGACGCTGAACAACAGAATCAGAATAAGGGTTCTTCTTCTTCTTCTCTATCATCCAAAGACACAAGTCTGGAAGAAGATGATTACCTTGAGTTTGTGAATCATGGCGGAGAACCTGCTTCGATAAAACGAAGGCGGGTATCCTGGAAGGACATCCATCCGTTATTTGTTAATGCTGTGAATCAACTTGGCGGCCCTGAAAATGCAAAGCCAAGACAGATTATTGAAATAATGAAAGTGCCTGGTCTAACGAGAGCACATGTTGGTAGTCACTTACAGAAATATAGAGAAAGATTAAAGAGAATGGAGGAAGAGCAGCAGCATTACTCAGTTTCTCACATGAATGGATCCCTTTTCACGATGGAACCCCATCTTTATAAGTACCACCTTGCTCGCCAGCCAATACAAATGCAAATACAACCACCTGAACAAAGCTTCAACAACTTTGGTCATGTGGTTCCAGCTTTAGGCTCTTATTATTATATTACTGCTACGGGAGGTGTTAGTAATGATGGAATTATAAATAAAAAACAAGCCCGGGGTACTCCATTTGGAAGTAATATGCAGCAGCAGCCACAGATTGGTACTTCCTTTGGGAGTAATCAAAACCTGACTTTCGGCATGCAACAACTGGATCAAATCCCAGCTTCAGGGTCTTCTTCTTGTGTTAATAATGCTACTAGAATTGCTAATAATGAAGGAATCATAAATAAAAAACAAGCCCTGGGTACTTCATTAGGAAGTAATATGCAGCTGCAACCACAGATTGACACTAACCTGACTTCTAGTATGCAACGACTAAATCAAAACCCAGCTTCAGGTTCTTCTTGTTATGTTGGTAGTATGGGAGGTGATAATAATGATGGAATCATAAATAAAAAACAAGCCCCGGGTACTTCATTTGGAAGTAATATGCAGCAGCAACCACATATTGGTACTTCCTTTGGGAGTAATCAAAACCTGACTTATGGTGTGGAACAACCTGATCAAGACCCATCTTCAGGTTCTTCTTCTTATGTTAGTACTGCTAGAGGTGCTAATAATGATGGAACCATGAATCAAAATCAAGCTATTTCCTTTAAAAGTAAGATGCTGCAGCAACCACAAATATCACAAGATCAAAATCTAGAAGCAGGCGGTCATGATGGAATCATCAATCCAGAAGCAGGCGGTCATGGTGGAATCATCAATCCAGAAGCAACACATGTTACCGAGGATCATGGGGAATTTGACTTCTTGAATACGCAATCATTTCAAGACCTGGAAAAAATTTTTGAATTATTGGATGATTATGAGCCATCACTTCAAGAGTTTGAATAG 1788 0.4094 MQESAANHCRYLPPFFSQYFRQPLKLLLVGTDHATQTSIQTYLPTSYYKITACDSGLGALRYLREKGPDSFDLVLSDIALKDIDGYQFIREQQLNPNIAHVAICGGERSTDEILTAYRSGACSVLWKPVSELGDEIGNLWRHVCRRREQHERTSKTHDAEQQNQNKGSSSSSLSSKDTSLEEDDYLEFVNHGGEPASIKRRRVSWKDIHPLFVNAVNQLGGPENAKPRQIIEIMKVPGLTRAHVGSHLQKYRERLKRMEEEQQHYSVSHMNGSLFTMEPHLYKYHLARQPIQMQIQPPEQSFNNFGHVVPALGSYYYITATGGVSNDGIINKKQARGTPFGSNMQQQPQIGTSFGSNQNLTFGMQQLDQIPASGSSSCVNNATRIANNEGIINKKQALGTSLGSNMQLQPQIDTNLTSSMQRLNQNPASGSSCYVGSMGGDNNDGIINKKQAPGTSFGSNMQQQPHIGTSFGSNQNLTYGVEQPDQDPSSGSSSYVSTARGANNDGTMNQNQAISFKSKMLQQPQISQDQNLEAGGHDGIINPEAGGHGGIINPEATHVTEDHGEFDFLNTQSFQDLEKIFELLDDYEPSLQEFE 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1588 595 PANTHER TWO-COMPONENT RESPONSE REGULATOR 25 363 IPR045279 GO:0009736
Alju06g1588 595 Coils Coil 241 268 - -
Alju06g1588 595 MobiDBLite consensus disorder prediction 448 507 - -
Alju06g1588 595 Gene3D - 25 178 - -
Alju06g1588 595 Gene3D - 197 259 - -
Alju06g1588 595 MobiDBLite consensus disorder prediction 444 507 - -
Alju06g1588 595 MobiDBLite consensus disorder prediction 151 176 - -
Alju06g1588 595 Pfam Response regulator receiver domain 27 130 IPR001789 GO:0000160
Alju06g1588 595 SMART REC_2 24 136 IPR001789 GO:0000160
Alju06g1588 595 SUPERFAMILY Homeodomain-like 198 257 IPR009057 -
Alju06g1588 595 SUPERFAMILY CheY-like 22 152 IPR011006 -
Alju06g1588 595 NCBIfam myb-like DNA-binding domain, SHAQKYF class 201 254 IPR006447 GO:0003677
Alju06g1588 595 ProSiteProfiles Response regulatory domain profile. 25 142 IPR001789 GO:0000160
Alju06g1588 595 MobiDBLite consensus disorder prediction 160 176 - -
Alju06g1588 595 MobiDBLite consensus disorder prediction 531 555 - -
Alju06g1588 595 FunFam Two-component response regulator 196 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1588 Alju-ChrAlju06 20559377 20561819 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1588 24 258 Response Regulator Gene Family AT2G25180 32.231 6.04e-27 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju06g1588 Response_reg 1e-10 CL0304