Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1578 ATGTTTGGCAGAATTAATCATGATGTATCAACCACAGCCCTCTTCAAGTTGCATTCAACAAAAACCGTTCCTCCAAATCCGAAGAAGTCAGCAGAGGTTCTTGTTGATGACAAGAAAAATCTGATTTTGACTCTGGTCATCACTCTAGGTTCAATTTCATTTGTTGCCTTACTCTTTGCAATATCTATTTTCCTCATCTACAAGCGTCAAGTCCATTCCTACATAAAGCTATCTGCAAGTGCAAATCTAGGATTCACTGAGGATTGTAGTCTACGAATTTTCTCCTTTGATGAATTGGTGAATGCAACAGAAAACTTCACAGAGGAGATCGGTAGAGGATCTTTTGGAGTGGTTTACAAGGGGGAAGTTCAAGGGAACAATAGAAGGATTGCTGTGAAGAAGCTAGACGATGATGTTGTTGATGAAGGAGAAAGAGAATTTCGAGCTGAAATCACAGCAATTGCTCGAACTCATCACAGAAATCTGGTTCAGCTCATTGGTTATTGCATCGATGGTTCAAGAAAGCTTCTTGTTTATGAATATATGAGCAATGGGTTTGAAGGATTTGTTGCTTTGTAA 579 0.3903 MFGRINHDVSTTALFKLHSTKTVPPNPKKSAEVLVDDKKNLILTLVITLGSISFVALLFAISIFLIYKRQVHSYIKLSASANLGFTEDCSLRIFSFDELVNATENFTEEIGRGSFGVVYKGEVQGNNRRIAVKKLDDDVVDEGEREFRAEITAIARTHHRNLVQLIGYCIDGSRKLLVYEYMSNGFEGFVAL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1578 192 SUPERFAMILY Protein kinase-like (PK-like) 75 185 IPR011009 -
Alju06g1578 192 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 12 185 - -
Alju06g1578 192 FunFam S-receptor-like serine/threonine-protein kinase 74 181 - -
Alju06g1578 192 Pfam Protein tyrosine and serine/threonine kinase 106 185 IPR001245 GO:0004672|GO:0006468
Alju06g1578 192 Gene3D Phosphorylase Kinase; domain 1 80 181 - -
Alju06g1578 192 ProSitePatterns Protein kinases ATP-binding region signature. 110 134 IPR017441 GO:0005524
Alju06g1578 192 ProSiteProfiles Protein kinase domain profile. 104 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1578 Alju-ChrAlju06 20105771 20107064 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1578 21 185 Receptor kinase-like Gene Family AT2G43690 38.182 7.14e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Alju06g1578 PK_Tyr_Ser-Thr 2.6e-15 CL0016