Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1551 ATGGTGCAGCCAGCAGTAGAGGCAGTGAAACCAAAAGGAGAGGTAGTGAATCCAAAAGCTTACCCTTTGGCAGATGCACAACTCACCATAACTATTTTGGATCTTGTTCAACAAGCTGCTAACTACAAGCTTCTCAAAAAGGGCGCTAATGAAGCAACTAAGACCCTAAACAGGGGTATTTCTGAGTTTATAGTCATGGCAGCAGACGCTGAGCCACTGGAGATTCTTCTCCATCTTCCTCTGCTTGCCGAAGATAAGAATGTGCCTTATGTATTTGTACCATCAAAGCAAGCTCTTGGCCGAGCGTGCGGTGTCACCCGTCCTGTTATCTCATGTTCAGTGTTGAGTAGTGAGGGGAGTCAACTAAAATCCCAAGTGCAACAACTCAAGGATGCCATTGAGAAGCTGTTAATATGA 417 0.4532 MVQPAVEAVKPKGEVVNPKAYPLADAQLTITILDLVQQAANYKLLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVISCSVLSSEGSQLKSQVQQLKDAIEKLLI 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1551 138 PRINTS High mobility group-like nuclear protein signature 31 46 IPR002415 GO:0003723|GO:0005730
Alju06g1551 138 PRINTS High mobility group-like nuclear protein signature 48 58 IPR002415 GO:0003723|GO:0005730
Alju06g1551 138 PRINTS High mobility group-like nuclear protein signature 92 104 IPR002415 GO:0003723|GO:0005730
Alju06g1551 138 PRINTS High mobility group-like nuclear protein signature 18 31 IPR002415 GO:0003723|GO:0005730
Alju06g1551 138 SUPERFAMILY L30e-like 16 136 IPR029064 -
Alju06g1551 138 CDD SNU13 17 138 - -
Alju06g1551 138 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 7 135 - -
Alju06g1551 138 ProSitePatterns Ribosomal protein L7Ae signature. 83 100 IPR004037 GO:0042254|GO:1990904
Alju06g1551 138 PRINTS Ribosomal protein L7A/RS6 family signature 90 104 IPR018492 -
Alju06g1551 138 PRINTS Ribosomal protein L7A/RS6 family signature 45 59 IPR018492 -
Alju06g1551 138 PRINTS Ribosomal protein L7A/RS6 family signature 80 90 IPR018492 -
Alju06g1551 138 PRINTS Ribosomal protein L7A/RS6 family signature 64 77 IPR018492 -
Alju06g1551 138 FunFam NHP2-like protein 1 homolog 12 138 - -
Alju06g1551 138 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 33 121 IPR004038 -
Alju06g1551 138 Gene3D - 10 138 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1551 Alju-ChrAlju06 19156853 19159135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1551 44 134 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 28.571 1.06e-06 44.7