Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1501 ATGGCTATCACTGTTTTGGCTTTTATGCTGTTACTGCAGTTGCCAAGAATTTTTGGCTTTGGGAATTTGTTTCAGTCAAAGGATTGTGGTGCGAATCGGGTTGCCTATTCACGTTCTCATGGTCAAGAACTATTTTACATAAACGAGAATGTTGTTAGCAAAGACACTTTCTGCAAGACCCTTCAGTTATATATGGCAAATGGTTGTGATGCCAAGTACTATGTTGGAAGTACAAGCTGTGGGCTGGGAGTTTCTTTTGGAAGAAAGCTTTTGCAGAAGGATATAAGCGATAACTCAACATTCCCAGGTCACAAGAACGCTACTATGCCCCTATCAGCCTCGAAAGTTGGCATGGCTGCAAGTGGAGCTTTTTTATGTTGTGTTTTTCTTTGTCCTTGTTTCCATGGGAAGAGACAAAAAGCTGCTGCTCATGCTTCCAAGGACCCAAATTCAATGGATTCAGCTTCCTCATTGGAAGGGAACTCTGTTTCTGAGAAGATCCATGGCTCTGTCCATCGGGTACCACCTAGTCCTTCAAGATTTTCAATGTCTCCAAAACTCAGTAGACTTGGGTCAATACATCTCAACTTGAGTCAGGTTATAAAAGCTACTCATAATTTCTCAAATAAATTACAAATAGGAGAAGGAGGTTTTGGAACTGTCTACAAGGCTCAGCTAGAAGGTGGTCAGGCTGTGGCAGTAAAGCGTGCCAAAAGGGAACATTTTGAGAGTTTGAAAACTGAATTCAGCAGTGAAGTTGAACTTCTGGCCAAAATTGATCATCGAAACCTGGTGAAGTTACTAGGTTATATTGACCAAGGAAATGAACGCCTTCTTATCGCAGAGTATGTCCCAAATGGTACTCTTAGAGAACATTTGGATGGTTTGCGTGGAAGGATTCTTGACATCAATCAGCGCCTTGAAATTGCCATTGATGTTACTCATGGCTTGACCTATCTACATCGCTACGCGGAAAAGCCAATTATCCATAGAGATGTGAAATCATCCAACATTCTTCTCACGGAAAGTATGAGAGCTAAAGTTGCTGATTTTGGATTTGCAAGACTTGGTCCAATGGACTCTGATCAAACACACATCTCTACCAAAGTGAAAGGAACAGTTGGTTATTTGGACCCAGAGTACATGAAAACATATCAGCTTACTCCCAAGAGTGATGTTTATTCATTTGGAATTTTGCTTTTAGAAATAGTGACCGGCCGCCGTCCTTTGGAGGTGAAGAAACCCCTTGAAGAGAGGGTGACATTGAGATGGGCTTTCAGAAAGTATAATGAAGGGAATGTGATGGAAATGGCGGATCCTTTAATGGAGGAAGGTATAAATGGAGAGGTTCTGATGAAGATGATTGGGTTAGCAATTCAATGTGCAGCACCAAGTCGAGTTGATCGGCCTGACATGAAATCGGTGGGAGAACAATTGTGGACAATCAGGGCAGAATTCCTCAAGAGTTCAAAAAGAGTATAG 1482 0.4184 MAITVLAFMLLLQLPRIFGFGNLFQSKDCGANRVAYSRSHGQELFYINENVVSKDTFCKTLQLYMANGCDAKYYVGSTSCGLGVSFGRKLLQKDISDNSTFPGHKNATMPLSASKVGMAASGAFLCCVFLCPCFHGKRQKAAAHASKDPNSMDSASSLEGNSVSEKIHGSVHRVPPSPSRFSMSPKLSRLGSIHLNLSQVIKATHNFSNKLQIGEGGFGTVYKAQLEGGQAVAVKRAKREHFESLKTEFSSEVELLAKIDHRNLVKLLGYIDQGNERLLIAEYVPNGTLREHLDGLRGRILDINQRLEIAIDVTHGLTYLHRYAEKPIIHRDVKSSNILLTESMRAKVADFGFARLGPMDSDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLLEIVTGRRPLEVKKPLEERVTLRWAFRKYNEGNVMEMADPLMEEGINGEVLMKMIGLAIQCAAPSRVDRPDMKSVGEQLWTIRAEFLKSSKRV 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1501 493 CDD STKc_IRAK 213 479 - -
Alju06g1501 493 SUPERFAMILY Protein kinase-like (PK-like) 190 482 IPR011009 -
Alju06g1501 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672|GO:0006468
Alju06g1501 493 Gene3D Phosphorylase Kinase; domain 1 178 283 - -
Alju06g1501 493 ProSiteProfiles Protein kinase domain profile. 207 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1501 493 Pfam Protein tyrosine and serine/threonine kinase 211 478 IPR001245 GO:0004672|GO:0006468
Alju06g1501 493 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 284 493 - -
Alju06g1501 493 FunFam Putative LRR receptor-like serine/threonine-protein kinase 179 283 - -
Alju06g1501 493 ProSitePatterns Protein kinases ATP-binding region signature. 213 235 IPR017441 GO:0005524
Alju06g1501 493 Gene3D Transferase(Phosphotransferase) domain 1 284 492 - -
Alju06g1501 493 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 113 485 - -
Alju06g1501 493 SMART serkin_6 207 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1501 Alju-ChrAlju06 17755493 17759381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1501 119 483 Receptor kinase-like Gene Family AT3G46290 40.107 4.26e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Alju06g1501 PK_Tyr_Ser-Thr 2.6e-49 CL0016