Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1490 ATGGATAACAAGACCACCTTCGACTCCCATATTGTTCTTCTACAATCGATCCGAAGCTACCTTCTTGATGACCACTCCAATGCTCTCATTGCATTTCCGGTCACATTCACCGGCGACGCTCCAGTTTGCCTCCAGAGTTCTAGCTCCGGGATGACGGAGAACAGCAACGGTGAGATCAGCTCTCCATCTTTCTCGCTCGAACAAGCAAACAGTGACTCCGTACAGGCAGAGCTTTGCAGGACAGATGCAGTGGAGCGCGGGGTTCACCTGCAGCCAAGTGGGAGAGGCTACAGAGGAGTAAGGCGGAGGCCGTGGGGGAAATACGCAGCGGAGATTAGAGATCCGAAGAAGAACGGCGCGAGAGTGTGGCTAGGGACTTATGAGACGGCTGAGGATGCAGCTTTGGCTTATGATCAAGCCGCTTTCAAGATCCGCGGCTCCAAAGCCAAGCTAAATTTTCCTCATCTCATTGGCTCGAATATGTCGGAACCACCAAGAGTGACCGGAAAGCGGCGGTTTCCAGAGCCTTGTGAGGAGAAGTCACGGACGGAAGTGAAGAGAGCGAAGAGCCGAGTGAACATGTTCATGTGGGATGCATAGTTACCTGAAGAAAATCCAAGTTCAAGTGAAAAGACCAACTGTGCTTTCTCATTACGCGGAGATTGTGATTTAATTAATTTGTGGATTCTTCATTTCCTAATTCATGCTGGATGGAAGGAAACAGAAAGGGGAGGAGAGCTGGAGGCAAGTGAGAGAGAAAACATCATGAAAGTGGTTGCAGAGGCAGGAAAGAAAGGAAATGAGCGGGTCCTGGAGAGAAATTTTCATAGGCATGTCATATTTGTGTAA 849 0.4947 MDNKTTFDSHIVLLQSIRSYLLDDHSNALIAFPVTFTGDAPVCLQSSSSGMTENSNGEISSPSFSLEQANSDSVQAELCRTDAVERGVHLQPSGRGYRGVRRRPWGKYAAEIRDPKKNGARVWLGTYETAEDAALAYDQAAFKIRGSKAKLNFPHLIGSNMSEPPRVTGKRRFPEPCEEKSRTEVKRAKSRVNMFMWDAXLPEENPSSSEKTNCAFSLRGDCDLINLWILHFLIHAGWKETERGGELEASERENIMKVVAEAGKKGNERVLERNFHRHVIFV 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1490 282 SMART rav1_2 96 160 IPR001471 GO:0003700|GO:0006355
Alju06g1490 282 CDD AP2 104 156 IPR001471 GO:0003700|GO:0006355
Alju06g1490 282 FunFam Ethylene-responsive transcription factor 2 95 155 - -
Alju06g1490 282 PANTHER DNA-BINDING DOMAIN 70 203 IPR044808 GO:0003700|GO:0009873
Alju06g1490 282 Gene3D AP2/ERF domain 96 155 IPR036955 GO:0003700|GO:0006355
Alju06g1490 282 ProSiteProfiles AP2/ERF domain profile. 96 154 IPR001471 GO:0003700|GO:0006355
Alju06g1490 282 PRINTS Ethylene responsive element binding protein signature 120 136 IPR001471 GO:0003700|GO:0006355
Alju06g1490 282 PRINTS Ethylene responsive element binding protein signature 97 108 IPR001471 GO:0003700|GO:0006355
Alju06g1490 282 Pfam AP2 domain 96 146 IPR001471 GO:0003700|GO:0006355
Alju06g1490 282 SUPERFAMILY DNA-binding domain 96 155 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1490 Alju-ChrAlju06 17354733 17356136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1490 94 193 AP2-EREBP Transcription Factor Family AT2G44840 69.000 2.78e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju06g1490 AP2 3.8e-15 CL0081