Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1489 ATGGAAACAGAACAACAAGAACCAGAAGCTCTCCTTCACAATCAACTTCAATTAACCACTGCCTCTTCTTCTTCTTCTTTTTCTTCCTCCGGCACCATAGAAGCCATTGATGTACACCATGAAGCTCATAAAAAAGAAGAGAGTGTGAAGAGGAAGAAGACGATGAAGAAGAACACAGACATGGTGGACGGGAAGTACCCAGCGTACAGTGGCGTACGTATGCGTCAATGGGGGAAATGGGTTTCAGAAATCAGAGAACCCCGAAAGAAATCCAGAATGTGGCTCGGCACTTTTCCCATGGTGGAAATGGCCGCTCGAGCTCACGACGTCGCCTCTCTCACCATTAAAGGCGCCTCTGCTTTCCTCAACTTCCCGGAACTAGCCTCCGTGCTTCCTGCTTGA 402 0.4851 METEQQEPEALLHNQLQLTTASSSSSFSSSGTIEAIDVHHEAHKKEESVKRKKTMKKNTDMVDGKYPAYSGVRMRQWGKWVSEIREPRKKSRMWLGTFPMVEMAARAHDVASLTIKGASAFLNFPELASVLPA 133
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1489 133 SUPERFAMILY DNA-binding domain 68 126 IPR016177 GO:0003677
Alju06g1489 133 MobiDBLite consensus disorder prediction 1 31 - -
Alju06g1489 133 SMART rav1_2 68 131 IPR001471 GO:0003700|GO:0006355
Alju06g1489 133 Gene3D AP2/ERF domain 68 126 IPR036955 GO:0003700|GO:0006355
Alju06g1489 133 MobiDBLite consensus disorder prediction 8 31 - -
Alju06g1489 133 ProSiteProfiles AP2/ERF domain profile. 68 125 IPR001471 GO:0003700|GO:0006355
Alju06g1489 133 FunFam Ethylene-responsive transcription factor 2 67 126 - -
Alju06g1489 133 CDD AP2 69 127 IPR001471 GO:0003700|GO:0006355
Alju06g1489 133 Pfam AP2 domain 67 117 IPR001471 GO:0003700|GO:0006355
Alju06g1489 133 PRINTS Ethylene responsive element binding protein signature 91 107 IPR001471 GO:0003700|GO:0006355
Alju06g1489 133 PRINTS Ethylene responsive element binding protein signature 69 80 IPR001471 GO:0003700|GO:0006355
Alju06g1489 133 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 46 132 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju06g1489 Alju-ChrAlju06 17334609 17335010 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1489 44 132 AP2-EREBP Transcription Factor Family AT5G11590 66.292 7.57e-37 124
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju06g1489 AP2 6.1e-12 CL0081