Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1468 ATGGGGAAGAAAAAGGACCAAGTGGGAGATAAATCAAGTGATGATGGCAGGAATCACAGCAAAGGTGGAGATGGTAGCCCCAAAGCTTATGATGAGGATACCGTGGTGTTCATATCCATGGCTCAGGAGTTAAAGGATGAGGGGAACAAGCTATTTCAAAAGAGGGACCATGAAGGAGCCCTGATAAAATATGAGAAAGCTCTCAAGTTGCTTCCGAAAAATCATATAGATGTGTCGTATCTACGGAGTAACATGGCAGCATGCTACATGCAGATGGGACTTGGTGAGTACCCCAGGGCAATACTTGAATGCAATTTAGCCCTTGAGGTTACACCGAAATACAGTAAGGCATTGTTGAAGAGGGCGAGGTGCTATGAAGGTTTAAATAGACTGGATTTGGCTCTTGGAGACGTTAGTACTGTTTTGCAGATGGAACCAAACAATATCATGGCATTGGAGATTTCTGAAAGGGTGAAAAAAACACTTGAGGAGAAAGGATTAAGAGTGAATGATACAGTGATTGAGTTGCCTCCTGATTATGTTGAACCTGCTTATGCTTTGCCTCCAGAAAAAACAGTGAAAGAGAAGACACGCAAGAAGAAGATCAACAAAGTTGAAGTGAAGACAATTGATAATAAAACCGTAGAAAAACAAGATGAGGAGAAATTGGAAGAGAAGAAGGTTGAGGACAATATTGAGAAGGCCGGGAAGAAGGCTGATGTGAAGAAATCCAAAAGGAAGGCGAAGGAAAAAATTGATGAGAAGAAGGCTGATGTTAAGGAGGTTATGGAGGAAACAATTAATGGTAGAAGAGATGATATACCTAAGAAAACAGCAAAACTTGTTTTTGGTGAGGACATAAGATGGGCTGAATTGCCAATTAATTGCAGCCTTTTGCGGTTAAGAGAAGTTATCTGTGACCGCTTCCCAAGCCTAGGAGCAGTTCTTGTCAAGTACAGAGACCAAGAAGGTGATTTGGTCACAATCACTTCTGATTCTGAATTGAGATTGGCTGAAACTTCAGCAGGATCACAAGGTTCAATCCGGCTGTACATTGTTGAAGCTACTCCTGAGCAGGATCCACTATTTGAGAAACTTAATAAAATGGAGGTGCTAAGGTCTCCTGTCAGTAAAGCACCTGAGAATGGTTGTGTGTTGAAAGAAAAGGAAGTGATAAACTCACCTTGTATTGAGGATTGGACAATCCGGTTTGCCCAGCTATTCAAAAACCATGTTGGATTTGAATCTGATAGATATTTGAATTTTCATGAGCTTGGGATGAAGCTCTATTCTGAGGCTATGGAGGATACAGTCACAAGTGAAGAAGCACAAGGCTTATTTGACATGGCAGGACATAAGTTCCAAGAGATGACAGCTCTAGCGTTGTTCAACTGGGGAAATGTTCACATGTCTAGGGCAAGGAAGAAAGTGTATTTCACTGAAGATTCTTCTAAGAAGCTTCTACATGAACAAATCAAAAGTGCATATGACTGGGCACAAAAAGAATATGAAAAAGCAGGAGAAAAATATGAAGCAGCCATTCAAATAAAATCCGATTTTTATGAAGGCTTTCTGGCGCTGGGGCAGCAACAATTTGAGCAGGCAAAACTTTCTTGGTATTATAATGCAATCAGCAGTGGTGCTGATTCGGCAACATGGCCCTCTGCTCGCATTCTTCAGCTTTACACCAATGCCGAAGATAATATGGAAAAAGGAATGCAGTTATGGGAACAGTCAGAGGAGCATAGCTTGATTGAAGCCTCTAAATCCAAGGATGTCAAATTGCTTTTACATGACATGGGATTGGATGGAATGTTTAAAAATATGTCAGCAGATGAAATTGCTGCACAGGCTGCAAATACGAGTTCTCAGATAAATCTGCTTTGGGGTACCATGCTATATGAGCGTTCAATTGTGGAATTCAAAGTTGGGTTACCAGTATGGCATGAATCTCTGGAAGTAGCTGTTGAGAAGTTTAAACTTGCTGGAGCTTCTCCAACAGATATAGCTGTGATGTTGAAGAATCACTGTTCAAATAATACTGCTGCAGATGGTCTAGAATTCAAAATCGATGAAATAGTACAAGCATGGAATGAGATGTATGAAGCTAAAAGGTGGCAGCGTGGAGTTCATTCATTTCGCTTGGAAACCTTATTTAGGAGGCGAGTTTCCAAAATCTATCATGCCTTGGAGCTTGTGTGA 2202 0.4101 MGKKKDQVGDKSSDDGRNHSKGGDGSPKAYDEDTVVFISMAQELKDEGNKLFQKRDHEGALIKYEKALKLLPKNHIDVSYLRSNMAACYMQMGLGEYPRAILECNLALEVTPKYSKALLKRARCYEGLNRLDLALGDVSTVLQMEPNNIMALEISERVKKTLEEKGLRVNDTVIELPPDYVEPAYALPPEKTVKEKTRKKKINKVEVKTIDNKTVEKQDEEKLEEKKVEDNIEKAGKKADVKKSKRKAKEKIDEKKADVKEVMEETINGRRDDIPKKTAKLVFGEDIRWAELPINCSLLRLREVICDRFPSLGAVLVKYRDQEGDLVTITSDSELRLAETSAGSQGSIRLYIVEATPEQDPLFEKLNKMEVLRSPVSKAPENGCVLKEKEVINSPCIEDWTIRFAQLFKNHVGFESDRYLNFHELGMKLYSEAMEDTVTSEEAQGLFDMAGHKFQEMTALALFNWGNVHMSRARKKVYFTEDSSKKLLHEQIKSAYDWAQKEYEKAGEKYEAAIQIKSDFYEGFLALGQQQFEQAKLSWYYNAISSGADSATWPSARILQLYTNAEDNMEKGMQLWEQSEEHSLIEASKSKDVKLLLHDMGLDGMFKNMSADEIAAQAANTSSQINLLWGTMLYERSIVEFKVGLPVWHESLEVAVEKFKLAGASPTDIAVMLKNHCSNNTAADGLEFKIDEIVQAWNEMYEAKRWQRGVHSFRLETLFRRRVSKIYHALELV 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1468 733 CDD PB1 284 352 - -
Alju06g1468 733 Coils Coil 238 265 - -
Alju06g1468 733 Pfam PB1 domain 278 354 IPR000270 GO:0005515
Alju06g1468 733 ProSiteProfiles PB1 domain profile. 276 355 IPR000270 GO:0005515
Alju06g1468 733 SMART PB1_new 276 355 IPR000270 GO:0005515
Alju06g1468 733 PANTHER PROTEIN CLMP1 3 731 IPR044517 -
Alju06g1468 733 SUPERFAMILY TPR-like 41 535 IPR011990 GO:0005515
Alju06g1468 733 SUPERFAMILY CAD & PB1 domains 277 365 - -
Alju06g1468 733 SMART tpr_5 115 148 IPR019734 GO:0005515
Alju06g1468 733 SMART tpr_5 41 74 IPR019734 GO:0005515
Alju06g1468 733 SMART tpr_5 79 114 IPR019734 GO:0005515
Alju06g1468 733 MobiDBLite consensus disorder prediction 1 28 - -
Alju06g1468 733 ProSiteProfiles TPR repeat profile. 41 74 IPR019734 GO:0005515
Alju06g1468 733 MobiDBLite consensus disorder prediction 1 30 - -
Alju06g1468 733 Gene3D Tetratricopeptide repeat domain 38 168 IPR011990 GO:0005515
Alju06g1468 733 Gene3D - 272 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1468 Alju-ChrAlju06 16590979 16593252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1468 29 148 Calmodulin-binding Proteins AT3G25230 32.836 2.48e-08 55.5