Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1464 ATGGACGGGCAAACGGGCAGGTCGGAGAAGGGGAAGGAGGAGGTCCGGTACCGGGGAGTTCGGAGGCGGCCGTGGGGGAAGTACGCGGCGGAGATCAGGGATCCGTCGAGGCAAGGGGCGAGACAGTGGCTGGGGACGTTTGATACGGCGGAGGAAGCAGCAAGAGCTTATGACAAAGCTGCCTTTAACATGAGAGGTCATCTCGCAATCCTTAATTTCCCCACCGAATACTATGCTCATGTACGAGGTTCCCCACCATATCCTCCCTACTTAGCTTCTTCTTCTTCTTCGCCTTCTTCTTCGTCGGCGTCACCGCCTTCTTTTCGTAGTCGTGCAAGTGGAAGCTCGTCGTCGTCTGGTGGACGGGGGCAAGTTTTTGAGTTTGAGTGTTTGGATAATCAAGTTCTGGAAGACCTTCTTGAACCAGAAGACGAAAAGAATAGAAGTAGTGGAGATTGA 459 0.5359 MDGQTGRSEKGKEEVRYRGVRRRPWGKYAAEIRDPSRQGARQWLGTFDTAEEAARAYDKAAFNMRGHLAILNFPTEYYAHVRGSPPYPPYLASSSSSPSSSSASPPSFRSRASGSSSSSGGRGQVFEFECLDNQVLEDLLEPEDEKNRSSGD 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1464 152 CDD AP2 16 74 IPR001471 GO:0003700|GO:0006355
Alju06g1464 152 Pfam AP2 domain 16 67 IPR001471 GO:0003700|GO:0006355
Alju06g1464 152 MobiDBLite consensus disorder prediction 84 123 - -
Alju06g1464 152 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Alju06g1464 152 PANTHER DNA-BINDING DOMAIN 9 145 IPR044808 GO:0003700|GO:0009873
Alju06g1464 152 FunFam Ethylene-responsive transcription factor 2 15 76 - -
Alju06g1464 152 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Alju06g1464 152 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Alju06g1464 152 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Alju06g1464 152 Gene3D AP2/ERF domain 15 76 IPR036955 GO:0003700|GO:0006355
Alju06g1464 152 MobiDBLite consensus disorder prediction 89 123 - -
Alju06g1464 152 SUPERFAMILY DNA-binding domain 16 76 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1464 Alju-ChrAlju06 16558576 16559034 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1464 13 146 AP2-EREBP Transcription Factor Family AT3G23230 59.701 5.70e-46 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju06g1464 AP2 6.8e-16 CL0081