Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju06g1461 | ATGGATAAATCCGGCGGCGGGATGGCGGCCAACAAGGACACGGATGGTGGCGGTGTCCGGTACCGGGGAGTACGGAGGCGGCCATGGGGGAAGTTCGCGGCGGAGATACGGGACTCCACGAACCAAGGGCAGAGGGTTTGGCTGGGGACTTTCGACACGGCGGAGGAAGCGGCGAGAGCGTACGACAGAGCCGCTTACAACATGAGAGGCTCATTTGCAATCCTGAACTTCCCCAATGAATACCCTCTCACTGCTAATCGTTCTAACAACACTGCATCGTCTTCGTCGTCATCCTCGTCGTCGTCAGCTGCTTCTTCTTCGAGGAGCCACCGTGAAGTGTTCGAGTTCGAGTACCTGGATGATAAACTTCTGGAGGAGCTTCTGGACTGTGAGGAGAAGAAGAAGAACGGAAAGTGA | 417 | 0.5635 | MDKSGGGMAANKDTDGGGVRYRGVRRRPWGKFAAEIRDSTNQGQRVWLGTFDTAEEAARAYDRAAYNMRGSFAILNFPNEYPLTANRSNNTASSSSSSSSSSAASSSRSHREVFEFEYLDDKLLEELLDCEEKKKNGK | 138 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju06g1461 | 138 | PRINTS | Ethylene responsive element binding protein signature | 21 | 32 | IPR001471 | GO:0003700|GO:0006355 | |
| Alju06g1461 | 138 | PRINTS | Ethylene responsive element binding protein signature | 44 | 60 | IPR001471 | GO:0003700|GO:0006355 | |
| Alju06g1461 | 138 | ProSiteProfiles | AP2/ERF domain profile. | 20 | 78 | IPR001471 | GO:0003700|GO:0006355 | |
| Alju06g1461 | 138 | MobiDBLite | consensus disorder prediction | 83 | 109 | - | - | |
| Alju06g1461 | 138 | Gene3D | AP2/ERF domain | 19 | 79 | IPR036955 | GO:0003700|GO:0006355 | |
| Alju06g1461 | 138 | SMART | rav1_2 | 20 | 84 | IPR001471 | GO:0003700|GO:0006355 | |
| Alju06g1461 | 138 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Alju06g1461 | 138 | SUPERFAMILY | DNA-binding domain | 20 | 79 | IPR016177 | GO:0003677 | |
| Alju06g1461 | 138 | FunFam | Ethylene-responsive transcription factor 2 | 20 | 79 | - | - | |
| Alju06g1461 | 138 | Pfam | AP2 domain | 20 | 70 | IPR001471 | GO:0003700|GO:0006355 | |
| Alju06g1461 | 138 | PANTHER | DNA-BINDING DOMAIN | 20 | 134 | IPR044808 | GO:0003700|GO:0009873 | |
| Alju06g1461 | 138 | MobiDBLite | consensus disorder prediction | 83 | 111 | - | - | |
| Alju06g1461 | 138 | CDD | AP2 | 28 | 79 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju06g1461 | Alju-ChrAlju06 | 16504835 | 16505251 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju06g1461 | 15 | 135 | AP2-EREBP Transcription Factor Family | AT3G23230 | 65.873 | 2.32e-47 | 148 |
Transcription factors information