Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1451 ATGTGTGTGCAGGACGCAGAGCAAGTTGATGAAGAAAATATAGATATGGAGACCCATGAGATCAGAAGCAAGACATGGCCTTTGCATTGTGATTTCTTGCGTACCCAGATGGAGAACTGGGAAAAGGAGCCTCCTTTAACAACTTCCAGTGTTGGAAATTCATTTCCTCTGGAAAGCATAGGTGAGGATGCAGTGATTGGAGACAGAAAACAGACGTTGATGAACTTTGTCCCCGTTCTCCGGTCCGGTGAGTGGTCAGATATTGGAGAACGTACTTATATGGAGGACACCCACATATGTGTTGAAGACATGGCAAAGGAATTTGGGTATAAAGTTATCAGTGAGGAAGCAGTTTCCTTTTATGGAGTATTTGACGGACATGGTGGTGAGAGTGCTGCGAAATTCGTCCGTGATTATCTGCCAGAGGTGATTGTAAAAGATTCTGAGTTTCCCGTGGAGATGGAGAAGGTGGTCACAAGGTCATTCTTGGAGACCGATGCTGCTTTTGCAAAGTTTTGTTCCTTTGAGTCTTCCATGTCTTCTGGTACAACTGCACTAACCGCCATTATACATGGAAGGGCTTTGCTTGTAGCCAATGCCGGAGACTGCAGGGCAGTGTTGTCCCGGTGTGGAGGTGCCATAGAAATGTCCAAAGATCACAGACCCTTATGCACCATAGAAAAGAAGAGGATTGAATCCTTAGGTGGATTCATTGATGATGGTTACCTGAATGGCCAACTCGGTGTCACACGGGCTCTAGGCGACTGGCACCTCGAAGGAATGAAGGAAATGAACGAAAGAGGACAAGGAGGGCCATTAACTGCTGAGCCAGAACTTAAACTGATGACACTAACCAAAGAAGATGAGTTCTTGATAATTGGGAGTGATGGAATCTGGGATGTATTCACCAACCAAAATGCAATCGATTTTGGCAGGAGGCGGCTTCGAAAGCACAATGACGTGAAACTGTGCTGCAAGGAAATGGTAGAGGAAGCCATAAAGAGAGGATCAAAAGACAACTTGACTGTTGTGATGGTCTGTTTCCACTCGGATCCACCGCCACCCGTGGTGGTAGAAAGGTTGAGAGTCAGGCGAAGCATTTCAGCTGAGGGACTTCAGAATCTAAGATCTCTATTAGAAGGATTAGAAGAATAA 1155 0.4571 MCVQDAEQVDEENIDMETHEIRSKTWPLHCDFLRTQMENWEKEPPLTTSSVGNSFPLESIGEDAVIGDRKQTLMNFVPVLRSGEWSDIGERTYMEDTHICVEDMAKEFGYKVISEEAVSFYGVFDGHGGESAAKFVRDYLPEVIVKDSEFPVEMEKVVTRSFLETDAAFAKFCSFESSMSSGTTALTAIIHGRALLVANAGDCRAVLSRCGGAIEMSKDHRPLCTIEKKRIESLGGFIDDGYLNGQLGVTRALGDWHLEGMKEMNERGQGGPLTAEPELKLMTLTKEDEFLIIGSDGIWDVFTNQNAIDFGRRRLRKHNDVKLCCKEMVEEAIKRGSKDNLTVVMVCFHSDPPPPVVVERLRVRRSISAEGLQNLRSLLEGLEE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1451 384 Gene3D - 69 351 IPR036457 -
Alju06g1451 384 CDD PP2Cc 81 348 IPR001932 -
Alju06g1451 384 SUPERFAMILY PP2C-like 71 349 IPR036457 -
Alju06g1451 384 Coils Coil 372 384 - -
Alju06g1451 384 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Alju06g1451 384 FunFam Probable protein phosphatase 2C 22 66 351 - -
Alju06g1451 384 ProSiteProfiles PPM-type phosphatase domain profile. 81 348 IPR001932 -
Alju06g1451 384 PANTHER PROTEIN PHOSPHATASE 2C 69 346 IPR015655 GO:0004722|GO:0006470
Alju06g1451 384 Pfam Protein phosphatase 2C 91 340 IPR001932 -
Alju06g1451 384 SMART PP2C_4 71 346 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1451 Alju-ChrAlju06 16311664 16315383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1451 76 382 PP2C-type Phosphatase Gene Family AT2G25620 58.958 2.65e-134 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Alju06g1451 PP2C 3.1e-65 CL0238