Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1450 ATGGCTGATGAAGGTCGCCGTGTAGAAGGGGAGGAGGGGCCAGAGACTTTAAACGCTCCCAGTCGGTGTCTTCCATTTTCAGCGTCACCACGTTACACTCCTCTAGCCGCCATTACCATTTCTCTCCGTCTCTTTCTCTTTCTGCAATTTTTCTTCTCTCTCTCCTCATCCTCTCTACCTCTTCGAATAATGGGTGGTACCAATAGTCGACACGTTTCTCGCCCATCTCGTCGAATCAATCACGCCAACCGCTTCAGTCTTTCCTCTCTTCTTCCCTGCGGTGCTTCCACTTCTCGCGCTACTTGTGAGATTGAAGATCATCCAACTGAACTTCTAGTAGACTCTGCTACAGACTTGAATGACCAAGTTCAGAAAGTTACAGAGGAATCATCTTTATCGCATTCAACAGAAGCTAGAACTAGCAGCTCACGTGTTGAAACTGGAACCTCCTTTGGTAGCAGTATTCAATCCAGTGAGAATGCCAATCCTCAAGATTCTTCCAGAAGTGTTGCAACTAGCAATCAGAGGGAGTGCTTGTTTAAAAGAAAGGAGTTAGTTCCTCATCATGAGGTAAGGACTGTTCATAGTCATAATGAATCTTATAAGGATAGTAGCAACACAGCTAGTACTTCATGTGTAGAACAGCAGTCTTCAGACCCAATCTCTGTAAATGGTTCTGCTAACAAGGATGTCGTTAATGATATTGATAATTCAGTGGATAGTAGTATCCCTCCAATATCTCATGAGACATTGCATCTAAGGAGTTCATCCCCTCAAGCGTATGAAGACCCCAGTTCTCGTGAAAATTATGTTGACAGTCACAGCAGTGGAGCTACAGCTTTCCAGAATTCTGATTCAAATCCCAGTTCTCCAGTCTCAGATCTGCCAGTAACTTCTCTGTTGCAAGAAAATGAATCTCGTGAGACAATTCCTCCAAGTTTAGGGGACAGGGAAAGAGGACATGTAAATGAGAGTGTGCTTCATGTTGATGTGGTTACTATATCTTCCAATACTTTGTCTCATGACAACACTGATGCCATTGATCATAGTGCCAGAAGAAATGGTAGGAGACCATTTTGGGATGCTTTTTCACATCATAGCTCTAGAAGGTTTCGTATTTCTCCAACCATTGTCTTCTCAGCTGGTGATCCTGATGACCTAGCATCTCAAGACCGATGGCTTCTTGATTTGAGCAGTGGTTTCTCAAGTGATGAGTCTGGAGAGGATTTTGAATATCTTGGCAGTAGAATCCGCAGATCTAATGCAGGATTCCTGCACTCAAGATCTCAGATCTGGGAAAGACTTCGTGATGGCCTCAATGAAACTGATCGGTGGACTAATTCTTGTCCATTAGGACTCCACCCTGATGGCAGGTGTTTCTGTGAGCCTTTCTCCACGACTGAGGAATCTAATACCCGAGCAAGCATGTCAAGAATAGTCATGCTTGCAGAAGCTTTATTTGAGTTTTTAGATGAAATTCATCGCCAACCCACACCATTTTCACTATCTGTGGCCTCTCTCCCAGCGCCAGAATCACTTGTTGACTCCTTCCCTCTGAAGTGTCACAAAACGGTTGACACAGCTGATGGTGGTAGTAATACTGAACAATGTCACATATGCCTGGTGGAGTATGAAGAAGGGGACAAAATTCGCGTTCTGCCTTGCAATCATGAGTTCCACATGGCATGCGTTGACAAGTGGCTTAAGGAAATACATGGTATATGTCCTCTCTGTCGTGGAAATGTTTGTGAAGGAGGTTTCACCGATTCTTCTATCTCAAACACACAAGTATAA 1794 0.4404 MADEGRRVEGEEGPETLNAPSRCLPFSASPRYTPLAAITISLRLFLFLQFFFSLSSSSLPLRIMGGTNSRHVSRPSRRINHANRFSLSSLLPCGASTSRATCEIEDHPTELLVDSATDLNDQVQKVTEESSLSHSTEARTSSSRVETGTSFGSSIQSSENANPQDSSRSVATSNQRECLFKRKELVPHHEVRTVHSHNESYKDSSNTASTSCVEQQSSDPISVNGSANKDVVNDIDNSVDSSIPPISHETLHLRSSSPQAYEDPSSRENYVDSHSSGATAFQNSDSNPSSPVSDLPVTSLLQENESRETIPPSLGDRERGHVNESVLHVDVVTISSNTLSHDNTDAIDHSARRNGRRPFWDAFSHHSSRRFRISPTIVFSAGDPDDLASQDRWLLDLSSGFSSDESGEDFEYLGSRIRRSNAGFLHSRSQIWERLRDGLNETDRWTNSCPLGLHPDGRCFCEPFSTTEESNTRASMSRIVMLAEALFEFLDEIHRQPTPFSLSVASLPAPESLVDSFPLKCHKTVDTADGGSNTEQCHICLVEYEEGDKIRVLPCNHEFHMACVDKWLKEIHGICPLCRGNVCEGGFTDSSISNTQV 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1450 597 MobiDBLite consensus disorder prediction 1 21 - -
Alju06g1450 597 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 502 584 IPR013083 -
Alju06g1450 597 MobiDBLite consensus disorder prediction 125 174 - -
Alju06g1450 597 Pfam Ring finger domain 536 579 IPR001841 -
Alju06g1450 597 MobiDBLite consensus disorder prediction 189 296 - -
Alju06g1450 597 MobiDBLite consensus disorder prediction 200 296 - -
Alju06g1450 597 ProSiteProfiles Zinc finger RING-type profile. 537 579 IPR001841 -
Alju06g1450 597 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 64 596 - -
Alju06g1450 597 SUPERFAMILY RING/U-box 531 583 - -
Alju06g1450 597 FunFam Putative RING zinc finger domain superfamily protein 504 584 - -
Alju06g1450 597 SMART ring_2 537 578 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1450 Alju-ChrAlju06 16300642 16305241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1450 448 583 C3H Transcription Factor Family AT5G45290 52.980 1.12e-41 156