Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1447 ATGGCTGGTATGCTTCCTGGAGTTGAATCTGCTCGAAGGAGACGCTTCCATCAGAGCGCGGTGTCCTCTGATTCCCCTTATTTCACCAGACGATCTTCCCTCTGTTTATATTCAAGCAATCACGAATCCCTTCTTTCCTCTTCTTCTCTCCAGCGAAGAAGCGTATTATACCAGGCGCGCTTGGATGAGAAGCTCGCAGGAGCAGCCGGAGAAGCCAAAGAAAGATTGGATGAGAGATTAAGATCAGCTCAGATGAAATCATCTAACAAAAGGCAAAACATCAAAGAGAAGCAGAAAAGCAGAGAGGGAAGGCCAGAGTTACACATAGAGGTATACGGATCAAAGAAAAGTGGTGGGTCAAGGATGATGTTCAATTGGAGGAAACTGAGCTGGAAGGCTTCAGATCAAGAGGATTGTGCTGTGTGCTTGGAGTCATTCAAGGTTGGGGATACACTAATCCATCTTCCTTGTGCTCACAAGTTTCATTGCAGCTGCTTAGAGCCATGGCTACAAAATAACAGTTATTGCCCATGTTGCAGAACTTCCATTATTAACGCTCAATAG 564 0.4539 MAGMLPGVESARRRRFHQSAVSSDSPYFTRRSSLCLYSSNHESLLSSSSLQRRSVLYQARLDEKLAGAAGEAKERLDERLRSAQMKSSNKRQNIKEKQKSREGRPELHIEVYGSKKSGGSRMMFNWRKLSWKASDQEDCAVCLESFKVGDTLIHLPCAHKFHCSCLEPWLQNNSYCPCCRTSIINAQ 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1447 187 Coils Coil 73 93 - -
Alju06g1447 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 186 IPR013083 -
Alju06g1447 187 PANTHER SI:CH211-59O9.10 10 184 - -
Alju06g1447 187 MobiDBLite consensus disorder prediction 81 107 - -
Alju06g1447 187 MobiDBLite consensus disorder prediction 1 22 - -
Alju06g1447 187 CDD RING-H2_PA-TM-RING 138 180 - -
Alju06g1447 187 ProSiteProfiles Zinc finger RING-type profile. 139 180 IPR001841 -
Alju06g1447 187 Pfam Ring finger domain 138 180 IPR001841 -
Alju06g1447 187 FunFam Zinc finger family protein 111 185 - -
Alju06g1447 187 SUPERFAMILY RING/U-box 127 184 - -
Alju06g1447 187 SMART ring_2 139 179 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1447 Alju-ChrAlju06 16273081 16274392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1447 1 81 C3H Transcription Factor Family AT2G15580 50.526 7.41e-19 76.3