Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1419 ATGGCTTCCCCTCAGTCCTTCCTTCTCTTCTCTATTTTCCTTCTTCATCTTCATTTTCAGTCTTCAACTTCACAAAGTTGGATCAAAGCTGGTTATTGGTATGTTGGCAGTGAATCCCCCATTCCTGACATAAACTCTGCTTTGTTCACACACCTTATATGCGCCTTCGCTAGCGTCAATCCCTCCACTTACGAGATCTCCATAGCCAAATCTGACCAACAATATTTCTCCATCTTCACCAACATCGTCAAGCGCAAAAACCCCTCGATCGTCACTCTTCTTTCTGTATGGAACGGACAGCCTGAAACTGCACAGGGTATTTTGGGCAAGAAGGCGAACGATTCGGTCATTTCTTCGATGATCAGAACCGCTTCCTCGAGAAAATCTTTCATTCAGTCCTCAATACAAACAGCTAGACGACATGGGTTTCAGGGCATTGACTTGTTTTGGCTTTGGCCTCAAGCAGAGTCAGATATGACCAACTTGGGAATTCTGCTTCACGAATGGCGACTTGCTGTGGATTCTGAGACCAGAAGCTCTGGAGAATCGTCGTTGATATTGAGTATGGGTCTTCATTACACGCCCATTGTTTTTGGGAATTTGAGTTACCCTATTGATTCTTTGGCGAAGAATTTGAACTGGGGTCATATTCTGGCTTATGATTATCATCTTCCTTCACTGGAGAATTTCACACATCCTCATGCTGCTCTGTATGATCCTGCGAGTCATGTGAATACTGATTTTGGTATAAGGAAATGGTTGACTATAGGGTTTCCTTCTAACAAGCTGCTTCTGGGATTGCCTTACCATGGCTATGCTTGGGCATTAGATAATCCCAAGGAAACTGCCATTGGTGCTCCATCATCGGGTCTGGCTGTGACACAAGACGGTTCGATGAGCTATAAGTATATAAAGTGGTATGTTCGGAGTTATGGTACTCCTACGTTGTATAATGCTACCTATGTCGTGAATTATTGCACCATTGGTTCAAGTTGGATCAATTTTGATGATGTTGAGGCCGTCAGAACTAAGGTTGCTTATGCCAAGGAAAAGAAACTGCTGGGATACAATGTGTTTCAGGTGATAAATGATGATAATTGGGTGCTTTCTAAGGCAGCTCAAGATGAAGAAACTGATCATGGAAACAGACGGAGGCTATTACTTATTATTTTACTTCCCATTTCAATGGTGATAACATTGGGAGTCATCCTTCTGTGTTGCTTAAGAAGCAAGTCACTCAAATCAAAAGTCAAGATGGTGTTCAGCAAAAGTTTCCGGCCTGAACCAGAAGGTCCCATTTTAAATGCTCAGAGCCTTGAAACCAGTGCTCCACATCTTGAAGAATTTAGCTTTGCCATCATAAAAGCGGCAACAAAAGACTTTTCTGTAGAAAACAAGCTAGGAGAGGGTGGATTTGGCCCTGTGTACAAGGGAAAACTACCAGGAGGACAAGAAATTGCAGTCAAGAGACTTTCAAAAGCTTCTACTCAAGGACATGAAGAATTTACAAATGAGGTTTCACTTACTGCAACGCTTCAGCATATCAATCTGGTTAGAGTTTTGGGATTCTGCAATGAGAGAGAAGAAAAAATGCTAATCTATCAGTACATGCCAAACAGAAGCTTGGATTTCTACCTTTACGATCCAATAAGGAAGCGACTATTGGATTGGGGGAAGCGTGTTCATATTATTGAAGGCATTGTCCAAGGACTTCTATATCTCCAAGAATATTCAAACTTCACAATCATACATCGAGATTTAAAAGCCAGCAACATCTTGCTCGATGATAAAATGAATTCAAAAATATCGGATTTTGGAATGGCTAAACTTTTTAGAAAAGATGAAGTTGAAGCAAATACTGAGCGAATTGTGGGGACATATGGTTATGTTCCTCCAGAATATGTTAGAAAAGGCACATACTCAATGAAGTATGATGTTTATAGCTTTGGAGTACTACTTTTGCAAATCATTAGTGGCAAGAGGAACACTTGCTATTATGGCACTGATGAGAACTTGAGCATTCTTGAATATGCCTATAATTTGTGGAAAGAGGGTAAAGGTTTGGAATTTGTTGATCCATCTCTAGAAGATTCATCTTCTTCCTGCAAACTTCTGCAATGTCTGCATGTAGCCCTACTCTGTGTGCAGGAAAATTCAGTAGAAAGGCCCTCAATGCTGGAGGTTTCTTCCATGCTTAAGAACGAAACTGAGGCAATTCCGTTGCCTAAAAGGCCAGCTTTCTCAACAAAAAGTGATCAAAAATTAGAAGACAGATCCTCAACAACATCACAGTCACAGCAAGCAAGTTGTTCCATAAATGATGCTTCAATTTCCCAAATAACACCCAGATAA 2352 0.4099 MASPQSFLLFSIFLLHLHFQSSTSQSWIKAGYWYVGSESPIPDINSALFTHLICAFASVNPSTYEISIAKSDQQYFSIFTNIVKRKNPSIVTLLSVWNGQPETAQGILGKKANDSVISSMIRTASSRKSFIQSSIQTARRHGFQGIDLFWLWPQAESDMTNLGILLHEWRLAVDSETRSSGESSLILSMGLHYTPIVFGNLSYPIDSLAKNLNWGHILAYDYHLPSLENFTHPHAALYDPASHVNTDFGIRKWLTIGFPSNKLLLGLPYHGYAWALDNPKETAIGAPSSGLAVTQDGSMSYKYIKWYVRSYGTPTLYNATYVVNYCTIGSSWINFDDVEAVRTKVAYAKEKKLLGYNVFQVINDDNWVLSKAAQDEETDHGNRRRLLLIILLPISMVITLGVILLCCLRSKSLKSKVKMVFSKSFRPEPEGPILNAQSLETSAPHLEEFSFAIIKAATKDFSVENKLGEGGFGPVYKGKLPGGQEIAVKRLSKASTQGHEEFTNEVSLTATLQHINLVRVLGFCNEREEKMLIYQYMPNRSLDFYLYDPIRKRLLDWGKRVHIIEGIVQGLLYLQEYSNFTIIHRDLKASNILLDDKMNSKISDFGMAKLFRKDEVEANTERIVGTYGYVPPEYVRKGTYSMKYDVYSFGVLLLQIISGKRNTCYYGTDENLSILEYAYNLWKEGKGLEFVDPSLEDSSSSCKLLQCLHVALLCVQENSVERPSMLEVSSMLKNETEAIPLPKRPAFSTKSDQKLEDRSSTTSQSQQASCSINDASISQITPR 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1419 783 Gene3D - 269 335 IPR029070 -
Alju06g1419 783 SMART serkin_6 461 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1419 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Alju06g1419 783 Gene3D Glycosidases 43 366 - -
Alju06g1419 783 SUPERFAMILY (Trans)glycosidases 29 378 IPR017853 -
Alju06g1419 783 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 27 380 IPR001223 GO:0005975
Alju06g1419 783 Gene3D Transferase(Phosphotransferase) domain 1 537 742 - -
Alju06g1419 783 Pfam Glycosyl hydrolases family 18 31 361 IPR001223 GO:0005975
Alju06g1419 783 Pfam Protein kinase domain 462 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1419 783 FunFam Uncharacterized protein 537 741 - -
Alju06g1419 783 SMART 2g34 27 364 IPR011583 GO:0008061
Alju06g1419 783 CDD GH18_plant_chitinase_class_V 25 370 - -
Alju06g1419 783 SUPERFAMILY Chitinase insertion domain 270 335 IPR029070 -
Alju06g1419 783 ProSiteProfiles Protein kinase domain profile. 461 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1419 783 MobiDBLite consensus disorder prediction 758 783 - -
Alju06g1419 783 FunFam Chitotriosidase-1 269 335 - -
Alju06g1419 783 MobiDBLite consensus disorder prediction 739 783 - -
Alju06g1419 783 FunFam Uncharacterized protein 436 536 - -
Alju06g1419 783 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 363 780 - -
Alju06g1419 783 Gene3D Phosphorylase Kinase; domain 1 435 536 - -
Alju06g1419 783 SUPERFAMILY Protein kinase-like (PK-like) 445 758 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1419 Alju-ChrAlju06 15891168 15897241 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1419 422 783 Receptor kinase-like Gene Family AT3G45860 50.543 5.72e-119 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju06g1419 Glyco_hydro_18 4.8e-57 CL0058