Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1416 ATGATGTCAAGAACTGCATTAGTTCTTTTGCTTGTTCCTCTTTATCTTCTTCCATTTCAATGTGCAGCAGAACAACAACTTGAGGTGAGAGCTGCTTACTGGATGACGGGTGGTATTTCCATTTCTGAAATCGACCCCACACTATTCACTCACCTCATATTTGTTCAAGCTTATGTCGACTCTGAATCCTTCGAGATCTCAATCCTCCCATCAGATGAGCTGGACTTCAAAGCATTCTCCCACAAAGTCAAAGAAAATAACCCATCCATCAAAACACTTCTAACTATTTGGGGAAAAGACAGGGATACATTTGCCGCCATGGTGAAAAATTCTTCTTCAATAAGTTCCTTCATCCAATCTTCACAAATAAAAGCCAGGACATATGGATTTGATGGCGTCGACCTTTACTGGGATTACCCTGACACAAAGAATGATATGGAAGGTATGTCAAGTCTTTTACAGGAGTGGCGTTTATATATAGATGTTCATGATCCAGAACTGCTCTTAACAGCCACTGTTCCATATTCACCATATTGGCCATTTAATGACTCTATTTATCCTATTGACTCAATGGCAACAAGCTTGGACTGGGTACATCTTAAAACTTTCTCTTACGTTATTGATCGGACGTCAGTAGTCACAGCCGCACATTCAGCTTTATATGACCCTTCAAGTATATATAACACAGACTTTGGGGTCAATCACTGGATTCATGGGGGTTTGATGCCTAACAAGATGGTTTTGGGGCTGGCATTTTTTGGGTATGCATGGAATCTAAGTGATCCTAATAACAAAGCAATAGGTGCGCCTGCGACGGGTACAGCCCAAACTAAACATCAATTGGGGCTGATGACATACAAGGAAGTCAAAGATCAAATTCAATCATGTCCCGGCAACATAAAATGCAATCGTCCATATGAAATCTACACCTGGTCATGTGGATCAACTTGGATAGCATATGACGATGTTGATACAATCAAAACTAAGGTGTCTTATGCCAAGGAAAATAAGTTGCGCGGTTACGTTGCATATCAAGTTTCCTATGACGACAATTGGTTGCTTTCCCGTGCAGCTAAAGGGGAAGATAATAAAGCTGAACACAAAGACCACAGGGCACGTTTGCTAAAGATTGTCTTGGCTGCAGCTGTCGTATCTGTCTTGCTATTAGGTTTCTTAGTCTACATTCTAAAGAGAAGAATGTTCAAATTAAAAGGTAAAGAAGATGCAGAAGATTTGAATGATAATGCTCCGGGTGTTAAAGTCTTTTCTTTCTCTGACATTGAAAGGGCCACAAACCGATTCTCAATTGAAAATAAGATTGGAGAAGGTGGTTTTGGAATTGTTTACAAGGGTATATTACCTGATGGTGAGGAAATAGCAGTGAAAAGACGATCAAAGGGATCCAAGCAAGGATTTAAGGAATTCAAAAATGAGACAACACTCAATGCAAAACTGCAACATGTCAATCTTGTTCGACTGTTAGGATACTGCAACGACAGGGAAGAACAAATGTTGGTTTATGAGTACATGCCAAACAAAAGTCTTGACTTTTATCTCTTTGACCCTACAAAGAAACTCCTTCTGGATTGGGAACAGCGTGTTTGTATCATTGAAGGAGTTACTCAAGGGCTTATCTACCTTCAAGAATATTCTAGATTGACAATAATTCATAGGGACTTGAAAGCTAGCAATATTTTATTGGATCATGAGATGAAGCCAAAGATTTCAGACTTTGGTATGGCAAGACCATTCAACAAACATGAACATGAAGAAAGCGCCAGCAAACTTGTAGGGACTTATGGCTATATACCTCCTGAGTATGTTGAGAAAGGATTGTGCTCCATTAAATCTGATGTTTACAGTTTTGGTATCATCCTCCTACAAATTATTAGTGGTAAAAGGATCTCAAGCTTATATGGAGAGAACAATGATTTGAACATCTTAGAATATGCATACGTGCTATGGAAAGAAGGGAAAGGCATGGAATTCATGGACTCTGCACTTGATGATACATCCTCTCAATGCAAATTGATTAGATTCTTGGAAATTGCTCTCCTCTGTGTCCAAAAAAATGCAGAAGATAGGCCATGCATGTTAGAAGTAGGCTCAATGCTCAGAAACAAAAGCAACTTCATAGCAATCCCAAAACAGCCAGCATATTCAAAGGTAGGAAATGAAGAGGCATTGAAGTTTATTCAGCAGCCAGAAATTTGTTCACGAAACGAAACAACAATGTCTCCAGTTTGGGGTCGTTAG 2256 0.3945 MMSRTALVLLLVPLYLLPFQCAAEQQLEVRAAYWMTGGISISEIDPTLFTHLIFVQAYVDSESFEISILPSDELDFKAFSHKVKENNPSIKTLLTIWGKDRDTFAAMVKNSSSISSFIQSSQIKARTYGFDGVDLYWDYPDTKNDMEGMSSLLQEWRLYIDVHDPELLLTATVPYSPYWPFNDSIYPIDSMATSLDWVHLKTFSYVIDRTSVVTAAHSALYDPSSIYNTDFGVNHWIHGGLMPNKMVLGLAFFGYAWNLSDPNNKAIGAPATGTAQTKHQLGLMTYKEVKDQIQSCPGNIKCNRPYEIYTWSCGSTWIAYDDVDTIKTKVSYAKENKLRGYVAYQVSYDDNWLLSRAAKGEDNKAEHKDHRARLLKIVLAAAVVSVLLLGFLVYILKRRMFKLKGKEDAEDLNDNAPGVKVFSFSDIERATNRFSIENKIGEGGFGIVYKGILPDGEEIAVKRRSKGSKQGFKEFKNETTLNAKLQHVNLVRLLGYCNDREEQMLVYEYMPNKSLDFYLFDPTKKLLLDWEQRVCIIEGVTQGLIYLQEYSRLTIIHRDLKASNILLDHEMKPKISDFGMARPFNKHEHEESASKLVGTYGYIPPEYVEKGLCSIKSDVYSFGIILLQIISGKRISSLYGENNDLNILEYAYVLWKEGKGMEFMDSALDDTSSQCKLIRFLEIALLCVQKNAEDRPCMLEVGSMLRNKSNFIAIPKQPAYSKVGNEEALKFIQQPEICSRNETTMSPVWGR 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1416 751 Pfam Protein kinase domain 435 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1416 751 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 365 IPR001223 GO:0005975
Alju06g1416 751 Gene3D Glycosidases 42 351 - -
Alju06g1416 751 SMART 2g34 28 349 IPR011583 GO:0008061
Alju06g1416 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 555 567 IPR008271 GO:0004672|GO:0006468
Alju06g1416 751 Gene3D Phosphorylase Kinase; domain 1 397 509 - -
Alju06g1416 751 ProSiteProfiles Protein kinase domain profile. 434 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1416 751 SMART serkin_6 434 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1416 751 SUPERFAMILY (Trans)glycosidases 32 360 IPR017853 -
Alju06g1416 751 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 510 713 - -
Alju06g1416 751 FunFam Uncharacterized protein 409 509 - -
Alju06g1416 751 Gene3D - 252 320 IPR029070 -
Alju06g1416 751 SUPERFAMILY Protein kinase-like (PK-like) 417 721 IPR011009 -
Alju06g1416 751 ProSitePatterns Protein kinases ATP-binding region signature. 440 462 IPR017441 GO:0005524
Alju06g1416 751 CDD STKc_IRAK 440 705 - -
Alju06g1416 751 Gene3D Transferase(Phosphotransferase) domain 1 510 717 - -
Alju06g1416 751 Pfam Glycosyl hydrolases family 18 33 349 IPR001223 GO:0005975
Alju06g1416 751 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 343 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1416 Alju-ChrAlju06 15835372 15839070 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1416 363 720 Receptor kinase-like Gene Family AT4G05200 48.901 8.54e-107 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju06g1416 Glyco_hydro_18 8.3e-52 CL0058