LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju06g1411	ATGTGTTTAAGAATATTTGCATTTATTCTTTCTCTTGCTTTTCTTTTTTCACCATTTCAGTTCTGCACAGAACATGATCGAGAAGCTTGGAAAAGGGTTGGTTTCTGGGTTCCGGACACTCCCGATTCAGAAATAGAATCCACACTCTTCACTCACCTTGTATTCGGTTTTCTTCACATAAACGCTTCGACTTTTGAGATCATATCTCAATCCCAAAAATACCTTGATTGCTTCTCCAGCACAGTCAAAATAAGGAACCCATCTCTCAAAACAATTCTCTCTATTTATGGAGCTGAAGATTTGAGCTTGATGATGAGCAATGCTTCTTCCAGACAAATCTTCATCCAATCTTCCTTCAACGTAGCTGCCACATATGGTTTCAACGGCATCGACTTTTTCTGGGCCCAAAATCAAGTAAAACAATCTGACATGAATAATATGGCAACATTCTTACATGAGTGGCGCCAAGCAGCAAAACATATAAATGAGGAATTCATCTTAACTGCAACTGTTCCCTTTTCTCCATCTTATTATTATAATTCCTCATCTATCATGTATCCTGTTGATTCCATGCAAGCAAACTTGAATTGGTTACATGTCAAAACTTTTGATTACACTTCTCCTTCCAACTCTTCATTTGCGTGGCCATCATCAGCTTTATATGACCCTTCCAATAGGGATGTGAGCACAGACCGTTTTATACGCGAATGGATTCATAGTGGGTTGTCGGAATCCAAATTGGTTATGGGTTTGCCTTTATTTGGGTTCTATTGGAATCTTGGTGACTTGAGGGATCATGAGAATGGAGAGAGTGCTCAACTTGATGGAATGATAGTGTACAAGGAAATCAAAGCTACAATTCAATTATTAGGAGGTGATTCAAAGTTCAATGGTACATATGTAGGTAACTACTGGACACAAGGATCGCTATGGATAGCTTTCGACGGTGTTGAGGCTATCAAAGAAAAGGTGTCTTACGCCAAGCAAAATAAGTTGCTGGGTTACTATTTGTGGTTAATTTCCTATGATGACAATTGGGAGCTTTCCCGCGCAGCGAAAGGAGAGGATAGGACAAGAAAGAAAGACAAGCTCAAGATTATTTTTATTGCAGTGGTTGCATCTGTTTTGCTATGTTGTGCCATAATCTTCAAACTAAAGGGGACAATTAAATCTGCTCAAAAATCTTCATCTGAAGCAGATATAGAAACTGCAGAAAATTTTCTTGGTAACATTCCTGATTTACAAGTATTTTCGTTCTCTGACATTGAAGATGCTACAAATAGATTCTCAATTGAAAATAAGATTGGAGAAGGAGGTTTCGGACTTGTGTATAAGGGAATCTTGCCAAATGATGAGAAGATAGCAGTGAAAATAAGATCAAAAAGTTCTAAACAAGGATTTGAGGAATTCAAAAATGAGATAATACTTGCTGCAAGACTACAACATGTAAATCTGGTTCGGTTGTTGGGGTTCTGCACTGATAAAGAAGAACAAATGCTGGTTTATGAGTATATGCCAAATAAGAGCCTTGACTTTTACCTCTTTGACCCTAACAAGCAACGTCTATTGGATTGGAGACAACGTGTTTGTATCATTGAAGGAGTTACTCAAGGTCTTCTTTATCTCCAAGAATATTCTAGTGGTTACATTGCGCCAGAATATGTAAAAAATGGACTGTGCTCTATTAAATCTGATGTGTATAGCTTTGGCGTCCTCCTCCTACAAATAATAAGCGGTAAAAGGATTTCAGGAATATATGGAGAGGATAATGATTTAAACCTCACGGAATACGCTTACAAGTTGAGGAAAGAAGGAAAAGGTATGGAGTTTATGGAAGCTTCACTTGATGATACATCTGCACACTGCAAATTGATGAGGTGCTTGCAAGTTGCACTCTTGTGCGTCCAAAATAATGCAGAGCATAGACCATGTATGTTACAAGTCTCTTCAATGTTAAGAACTGAAGACAACAGTGTTGCATCACCAAATCAACCTGCTTATTCTAAACAAGAAAATGATGAAGGAGAAACAGTTGCCTTTGTTCAAAGATCGGAATGTTCACAAAATGAAACAACAATGTCTCCGGTACTAGGGCGGTAA	2100	0.381	MCLRIFAFILSLAFLFSPFQFCTEHDREAWKRVGFWVPDTPDSEIESTLFTHLVFGFLHINASTFEIISQSQKYLDCFSSTVKIRNPSLKTILSIYGAEDLSLMMSNASSRQIFIQSSFNVAATYGFNGIDFFWAQNQVKQSDMNNMATFLHEWRQAAKHINEEFILTATVPFSPSYYYNSSSIMYPVDSMQANLNWLHVKTFDYTSPSNSSFAWPSSALYDPSNRDVSTDRFIREWIHSGLSESKLVMGLPLFGFYWNLGDLRDHENGESAQLDGMIVYKEIKATIQLLGGDSKFNGTYVGNYWTQGSLWIAFDGVEAIKEKVSYAKQNKLLGYYLWLISYDDNWELSRAAKGEDRTRKKDKLKIIFIAVVASVLLCCAIIFKLKGTIKSAQKSSSEADIETAENFLGNIPDLQVFSFSDIEDATNRFSIENKIGEGGFGLVYKGILPNDEKIAVKIRSKSSKQGFEEFKNEIILAARLQHVNLVRLLGFCTDKEEQMLVYEYMPNKSLDFYLFDPNKQRLLDWRQRVCIIEGVTQGLLYLQEYSSGYIAPEYVKNGLCSIKSDVYSFGVLLLQIISGKRISGIYGEDNDLNLTEYAYKLRKEGKGMEFMEASLDDTSAHCKLMRCLQVALLCVQNNAEHRPCMLQVSSMLRTEDNSVASPNQPAYSKQENDEGETVAFVQRSECSQNETTMSPVLGR	699

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju06g1411	699	SMART	2g34	30	343	IPR011583	GO:0008061
	Alju06g1411	699	Gene3D	Glycosidases	44	345	-	-
	Alju06g1411	699	Gene3D	Phosphorylase Kinase; domain 1	387	504	-	-
	Alju06g1411	699	Pfam	Protein tyrosine and serine/threonine kinase	549	651	IPR001245	GO:0004672\|GO:0006468
	Alju06g1411	699	Pfam	Protein tyrosine and serine/threonine kinase	430	544	IPR001245	GO:0004672\|GO:0006468
	Alju06g1411	699	Gene3D	Transferase(Phosphotransferase) domain 1	545	676	-	-
	Alju06g1411	699	FunFam	Uncharacterized protein	405	504	-	-
	Alju06g1411	699	ProSitePatterns	Protein kinases ATP-binding region signature.	435	457	IPR017441	GO:0005524
	Alju06g1411	699	ProSiteProfiles	Glycosyl hydrolases family 18 (GH18) domain profile.	30	359	IPR001223	GO:0005975
	Alju06g1411	699	MobiDBLite	consensus disorder prediction	655	674	-	-
	Alju06g1411	699	Gene3D	-	253	314	IPR029070	-
	Alju06g1411	699	SUPERFAMILY	(Trans)glycosidases	30	352	IPR017853	-
	Alju06g1411	699	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	185	546	-	-
	Alju06g1411	699	Pfam	Glycosyl hydrolases family 18	33	343	IPR001223	GO:0005975
	Alju06g1411	699	SUPERFAMILY	Protein kinase-like (PK-like)	413	677	IPR011009	-
	Alju06g1411	699	ProSiteProfiles	Protein kinase domain profile.	429	699	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju06g1411	Alju-ChrAlju06	15673776	15678870	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju06g1411	367	667	Receptor kinase-like Gene Family	AT4G23190	38.983	4.35e-71	240

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Alju06g1411		Glyco_hydro_18	4e-52	CL0058