Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1410 ATGTTCTCCAGAATTGCAATCACGTCTCTTCTGATCATTCATGTTCTTCTTCTATCACAATTTCCACCATTACAATCACAATCTTCTTGGGTTCAATCAGCTTACTGGTTCTCTGGTAGTGGATTTCCAGTTTCCGATATAAACTCTAATCTCTTCACCCACCTCATTTGCGCCTTCGCCAATGTCAACTATTCGTCCTTCGAGCTTTCTATTGCTTCAGACGACGAGCAATCCTTCTCTACTTTCACGATTTCCGTAAGACGAAGGAACCCTTCCGTCATTACGCTTCTCTCTATCGGAGGCGGGCTCGCCGATTACTCTGTGTTGTCGTCGATGGTAAGCAATGTTTCTTCTCGGACATCTTTCATTCAGTCCTCTATTAGAATCGCTAGGTCTTATGGGTTTCAAGGGCTTGACCTATCCTGGGTTTCTGCTAATACAAGCTCTGACATGAACAATATGGGAATGTTTTTTAAAGAGTGGCGAGAAGCTGCAAATTCTGAGGCTCAAAACACTAGTGACGCACAATTGATCTTAACAGCAGCTGTTCAATTTAGCCCCGGTCCGGATTTTGGATCCTACCCAGTTGAATCAATCAGAAGCAACTTGAACTGGGTAAATGTTTTGGCTTATGATTACTACGCGCCTACATGGACAAATTTTACTGCTGCTCACGCTGCTTTGTATGATCCTTCAAGTGATGTGAACACTGACTCTGGTATTAAGGAATGGATTGGTAGAGGAGTTTCTGCTAACCAGTTGGTTTTGTCTTTGCCTTTTTATGGATATGCCTGGACTCTTAAGAACCCAAAGGACAATGCAATAGGGGCACCGGCTACCGGTCCAGCAATTACAAATGATGGGGATATGAGTTATAAGGACATCAAAGCTTATGTTCAGAGATATGGGGCTACAGTACTGTATAATTCTACTTATGTAGTGAATTACTTCTCAGTTGGATCAAATTGGATTGGTTTTGATGGTGTTGAGGTTCTCAAAATGAAGGTGTCTTATGCAAGGGAAAAGAAGCTACTTGGTTATGTTGTGTGGGCTATCTCCTATGATGACAACAATTGGGAGCTTTCCACTGCAGCAGCTAAAAAATTTGAAGAAAGTGGACACAGTAGAAGAAAGTTATTAGTGATCATTTTGAGTCCAACAGCAGCATTTATTCTCCTATTAGGAGCCCTGATGTTCTGCCTAAAGAAGAGAATAATCAAATCAACAGAGATGGTTAAAGCTGCTCGAGAATCTAGGTTTAAAGCAAATAAACAAGGTGCAGAACATTTCCAGGGCAATCCTCCTGATTTGCAAGTATTCAGATTTTCAGAAATTGAGGAGGCCACAGATGGATTTTGCATTGAAAATAAGCTTGGTGAGGGTGGTTATGGTCCTGTTTACAAGGGTGTATTAGCAGATGGTCAGGAAATAGCAGTGAAAAAGCTGTCAAAAGCTTCAACGCAAGGATTTGAGGAATTCAAAAATGAGGTAACACTTACTGCAAGACTACAACATGTGAATCTTGTTCGGCTCTTGGGGTTCTACATTGATAGAGAGGAACAAATACTGGTTTATGAGTACATGCGGAACAAAAGCCTTGACTTCTACATCTATGATCCTATAAGACGATATTTACTTGATTGGAGGAAGCGTGTTGACATCATTGAAGGAATTGTTCAAGGGCTTGTTTACTTACAAGAATACTCAAGATTAACAATAATTCATAGAGACATCAAAGCTAGCAATATTTTGTTAGATGATGAGTTGAAGCCAAAGATATCAGATTTTGGTATGGCGAGAATATTCGCGAAGGATGAACTTGAAGCAAACACGGGCAAGATAGTCGGAACTTATGGCTATGTTCCTCCTGAATATGTTAAAAAAGGGCTATACTCCACAAAGTCTGATGTGTATGGTTTTGGAGTTCTACTTCTACAAATTATAAGTGGCAATAGGACCACAAGTTTTTATGGTGAACATGAAAATTTAAACCTCACAGGATATGCTTACGAACTGTGGAAAGAAGGGAAAGGCATGGAGTTTATGGATCCTACTCTTGATGACTCATCTTCACCATGTAAATTGCTGAGGTGCATGCGAATTGCTCTGTTATGCGTGCAGGAAAGTGCAAATGACAGGCCTTCTATGTTAGAAATTTCTTCAATGTTGAAAAGTGAAAGCAACTTGACACTCCCAAAGAAACCTGCCTTTTCTAGGGAGAATAAAAGGGAAGAAGAGGCAAGTGAAAGAATAGTGCAGGTGGAAACTAAGTCAATTAACCAAGTGACGGTCTCTGAAGTAGTAGCCAGATAG 2313 0.4051 MFSRIAITSLLIIHVLLLSQFPPLQSQSSWVQSAYWFSGSGFPVSDINSNLFTHLICAFANVNYSSFELSIASDDEQSFSTFTISVRRRNPSVITLLSIGGGLADYSVLSSMVSNVSSRTSFIQSSIRIARSYGFQGLDLSWVSANTSSDMNNMGMFFKEWREAANSEAQNTSDAQLILTAAVQFSPGPDFGSYPVESIRSNLNWVNVLAYDYYAPTWTNFTAAHAALYDPSSDVNTDSGIKEWIGRGVSANQLVLSLPFYGYAWTLKNPKDNAIGAPATGPAITNDGDMSYKDIKAYVQRYGATVLYNSTYVVNYFSVGSNWIGFDGVEVLKMKVSYAREKKLLGYVVWAISYDDNNWELSTAAAKKFEESGHSRRKLLVIILSPTAAFILLLGALMFCLKKRIIKSTEMVKAARESRFKANKQGAEHFQGNPPDLQVFRFSEIEEATDGFCIENKLGEGGYGPVYKGVLADGQEIAVKKLSKASTQGFEEFKNEVTLTARLQHVNLVRLLGFYIDREEQILVYEYMRNKSLDFYIYDPIRRYLLDWRKRVDIIEGIVQGLVYLQEYSRLTIIHRDIKASNILLDDELKPKISDFGMARIFAKDELEANTGKIVGTYGYVPPEYVKKGLYSTKSDVYGFGVLLLQIISGNRTTSFYGEHENLNLTGYAYELWKEGKGMEFMDPTLDDSSSPCKLLRCMRIALLCVQESANDRPSMLEISSMLKSESNLTLPKKPAFSRENKREEEASERIVQVETKSINQVTVSEVVAR 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1410 770 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 134 765 - -
Alju06g1410 770 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 416 527 - -
Alju06g1410 770 Pfam Glycosyl hydrolases family 18 35 355 IPR001223 GO:0005975
Alju06g1410 770 Pfam Protein kinase domain 455 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1410 770 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 30 372 IPR001223 GO:0005975
Alju06g1410 770 Gene3D - 260 326 IPR029070 -
Alju06g1410 770 CDD GH18_plant_chitinase_class_V 28 361 - -
Alju06g1410 770 Gene3D Glycosidases 44 357 - -
Alju06g1410 770 MobiDBLite consensus disorder prediction 730 750 - -
Alju06g1410 770 SUPERFAMILY (Trans)glycosidases 33 369 IPR017853 -
Alju06g1410 770 Gene3D Transferase(Phosphotransferase) domain 1 528 745 - -
Alju06g1410 770 ProSiteProfiles Protein kinase domain profile. 452 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1410 770 SUPERFAMILY Protein kinase-like (PK-like) 435 736 IPR011009 -
Alju06g1410 770 SUPERFAMILY Chitinase insertion domain 261 326 IPR029070 -
Alju06g1410 770 FunFam Uncharacterized protein 528 732 - -
Alju06g1410 770 Gene3D Phosphorylase Kinase; domain 1 410 527 - -
Alju06g1410 770 ProSitePatterns Serine/Threonine protein kinases active-site signature. 573 585 IPR008271 GO:0004672|GO:0006468
Alju06g1410 770 CDD STKc_IRAK 458 724 - -
Alju06g1410 770 SMART serkin_6 452 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1410 770 MobiDBLite consensus disorder prediction 736 750 - -
Alju06g1410 770 SMART 2g34 30 355 IPR011583 GO:0008061
Alju06g1410 770 FunFam Chitotriosidase-1 260 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1410 Alju-ChrAlju06 15651987 15655391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1410 373 737 Receptor kinase-like Gene Family AT4G05200 47.541 6.64e-110 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju06g1410 Glyco_hydro_18 6.7e-65 CL0058