Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1391 ATGTCATCGACTGTCGCCAGCCACCGGCGGGTAGAGTTGGAAAAACGGGTTGAGTCTGTCGGATCAACCCTTAATTCTGAGCTGGTGCCGTTGTTGAGTTCTCTCGCCTCCATCTCCGTCAGCAACAAGCAAGCTTTTCATCTTCAGAACTTTGACAAAATGTCAGGAGAAGAAGATGTACCAGTAACAACTGAGGCTTCAGCACCCTTGGGTGAGAGCATGGACATCATGACTGCCTTGCAGCTTGTGCTGAGGAAGTCTCTTGCTCATGGAGGTCTTGCAAGAGGACTCCATGAAGGTGCCAAGGTGATCGAAAAGCATGCTGCACATCTCTGTGTGCTTGCTGAGGACTGTGATCAGCCTGATTATGTTAAACTGGTCAAGGCACTCTGTGCTGATCACAATGTGAAATTGATGACTGTTGCCAGTGCTAAAACCCTCGGCGAATGGGCTGGTTTGTGCAAGATTGATTCTGAAGGGAAAGCAAGGAAAGTAGTTGGCTGCTCCTGTGTTGTTGTGAAGGATTTTGGAGAGGAGTCACCAGCATTAGATATTGTTCAGCAATACATAAAGGCTCAATAA 582 0.4777 MSSTVASHRRVELEKRVESVGSTLNSELVPLLSSLASISVSNKQAFHLQNFDKMSGEEDVPVTTEASAPLGESMDIMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHLCVLAEDCDQPDYVKLVKALCADHNVKLMTVASAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEESPALDIVQQYIKAQ 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1391 193 FunFam 40S ribosomal protein S12 60 193 - -
Alju06g1391 193 ProSitePatterns Ribosomal protein S12e signature. 79 97 IPR000530 GO:0003735|GO:0005840|GO:0006412
Alju06g1391 193 SUPERFAMILY L30e-like 71 192 IPR029064 -
Alju06g1391 193 Gene3D - 57 193 IPR029064 -
Alju06g1391 193 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 79 172 IPR004038 -
Alju06g1391 193 PRINTS Ribosomal protein S12E family signature 163 176 IPR000530 GO:0003735|GO:0005840|GO:0006412
Alju06g1391 193 PRINTS Ribosomal protein S12E family signature 138 159 IPR000530 GO:0003735|GO:0005840|GO:0006412
Alju06g1391 193 PRINTS Ribosomal protein S12E family signature 97 113 IPR000530 GO:0003735|GO:0005840|GO:0006412
Alju06g1391 193 PRINTS Ribosomal protein S12E family signature 83 96 IPR000530 GO:0003735|GO:0005840|GO:0006412
Alju06g1391 193 PANTHER 40S RIBOSOMAL PROTEIN S12 67 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1391 Alju-ChrAlju06 15412857 15416301 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1391 72 193 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 72.951 1.15e-64 194