Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1390 ATGCGTGGTTCATCTTCCCTCCTTATAAATACCCAAATGCTTCTCTCCCTCTTCACTCACTCACTCACCAAACAGCACTCCTCCAATCCAAACCACCTTCTTCTTCAGCTTCCTCATTCGCGAGATTTCCTAATTCGTTTTCTCTCTCAAATGGCTGGAACTGGAGTGTTTGCTGAGATTTTAGACGGAGATGAATACAAGTACTACTCTGATGGCGAATGGAAGAAATCCTCTTCTTCCAAAACTGTTTCCATCATCAATCCTACCACCCGAAAACATCAGTACAAAGTTCAGGCGTGCACACAAGAAGAGGTCAACAAAGTCATGGACTTGGCAAAAGCTGCACAGAAGTCATGGGCCAAGACTCCGCTGTGGAAACGAGCTGAACTCCTTCATAATGCAGCTGCTATCCTCAAGGAGCACAAGGCTTCAATTGCAGAGTGCCTGGTGAAAGAAATAGCAAAGCCAGCCAAAGATGCCGTAACTGAGGTGGTAAGATCAGGGGATCTGGTTTCTTACTGTGCTGAAGAAGGTGTGAGGATTCTGGGAGAGGGAAAATTCTTGGTATCGGATAGTTTTCCTGGAAACGAAAGGACAAAATATTGCCTGACATCCAAGATTCCATTGGGAGTGATTTTAGCCATTCCACCATTTAACTACCCTGTCAACCTTGCTGTGTCAAAAATTGCTCCTGCGCTGATTGCTGGAAACTCCATTGTGCTGAAGCCTCCAACTCAGGGGGCTGTTTCTGCACTACATATGGTGCATTGCTTTCACTTGGCTGGTTTTCCCAAAGGCCTAATCAGTTGTATTACTGGAAAAGGATCTGAGATTGGGGACTTCCTCACTATGCATCCAGGAGTTAACTGTATAAGCTTCACTGGAGGAGATACTGGGATTTCAATTTCAAAGAAAGCAGGCATGATTCCTCTGCAAATGGAGTTGGGAGGAAAAGATGCCTGTATTGTGCTTGAAGATGCTGACCTGGATTTGGTGGCTTCAAATATTATAAAAGGAGGCTTTTCTTACAGTGGTCAGAGGTGCACTGCTGTTAAGGTTGTCCTAGTGATGGAATCCATTGCCGATGCTCTAGTAGAGAAAGTGAAGGAACAGGTGGCAAAACTGACTGTTGGGCCACCTGAGAATGATTGTGACATCACTCCGGTTGTGTCGGAATCATCAACCAATTTCATTGAAGGTCTGGTTATGGATGCTATGAAGAAAGGGGCAACATTTTGCCAGGAATACAGAAGAGAAGGGAACCTGATTTGGCCTTTGTTGCTGGATAATGTGAGGCAGGATATGAGAATAGCTTGGGAGGAGCCGTTTGGACCAGTTTTGCCAGTTATTAGGATCAACTCTGCTGAAGAAGGAATCAGCCATTGCAATGCTAGCAATTTTGGACTTCAGGGTTGTGTGTTCACAAAGGATGTGAACAAAGCAATTTTGATCAGTGATGCAATGGAGACAGGAACAGTTCAGATAAACTCTGCCCCAGCTCGTGGACCAGATCATTTTCCCTTCCAGGGTATCAAGGACAGTGGAATTGGATCCCAAGGCATTACCAACAGCATAAACATGATGACCAAAGTAAAGACAACTGTGATCAATTTACCCTCCCCTTCTTATACCATGGGCTGA 1641 0.4491 MRGSSSLLINTQMLLSLFTHSLTKQHSSNPNHLLLQLPHSRDFLIRFLSQMAGTGVFAEILDGDEYKYYSDGEWKKSSSSKTVSIINPTTRKHQYKVQACTQEEVNKVMDLAKAAQKSWAKTPLWKRAELLHNAAAILKEHKASIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVSALHMVHCFHLAGFPKGLISCITGKGSEIGDFLTMHPGVNCISFTGGDTGISISKKAGMIPLQMELGGKDACIVLEDADLDLVASNIIKGGFSYSGQRCTAVKVVLVMESIADALVEKVKEQVAKLTVGPPENDCDITPVVSESSTNFIEGLVMDAMKKGATFCQEYRREGNLIWPLLLDNVRQDMRIAWEEPFGPVLPVIRINSAEEGISHCNASNFGLQGCVFTKDVNKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKTTVINLPSPSYTMG 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1390 546 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 341 352 IPR016160 GO:0016491
Alju06g1390 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 317 507 IPR016163 GO:0016620
Alju06g1390 546 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 72 331 - -
Alju06g1390 546 SUPERFAMILY ALDH-like 65 537 IPR016161 GO:0016491
Alju06g1390 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 72 533 IPR016162 GO:0016491
Alju06g1390 546 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 313 320 IPR029510 GO:0016491
Alju06g1390 546 PANTHER ALDEHYDE DEHYDROGENASE 48 545 - -
Alju06g1390 546 CDD ALDH_F11_NP-GAPDH 65 537 - -
Alju06g1390 546 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 317 507 - -
Alju06g1390 546 Pfam Aldehyde dehydrogenase family 74 533 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1390 Alju-ChrAlju06 15378304 15382932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1390 51 546 Aldehyde Dehydrogenase Gene Family AT2G24270 89.516 0.0 937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1390 06 15378304 15382932 Alju06g1390 06 15378304 15382932 ECH