Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1389 ATGCAGCCTTGTAGCAGAGAAATGCAAAGAATAAACTCTCTCTTGAACTCTTCTTCTCAGATTCCTCTCTCCGACCTTCACCAGATCCAAAATTCTCAGATGCATCGCTTCGACCCTTCTTCCCACGATGATTTCCTCGACCAAATGCTCTCCAGCCTTCCATCTTCCTCTTGGCCGGACCTTAACCCCAAGCCCTTCTGGGACGATACGCCCCCACCGCCTTCCCACGCTGCCGCCGAGAATGTTGTGTTTCAGTACGATGACCAAGCCAGCTTGGCTTCCAAATTCCGAAACCACCAGATCAGTAGTGACGACGGTAACCTCTCTACCAAGTCGTCGACTACAGCAGCTCTGATGATCCAGGCTCAGCAACAGCTTCTGATGTCCCGAGGTCTCGCCGGAGCCGGTGACTCAGGCCTCCTTCCGTTGCCGTTGTCGTTGGGCGGCGCCGGAGATGTTGACTGCTCCAGAAACGACGTCGTGGAGGGGTCGTCGTTCAAATCTCCTAATCCGGGTGGTGACAGTTCAGTTCAAGCCCTGTATAACGGATTCACCGGTTCTCTGCATGGCGGTGGTCAAGTTCCGAATCAGACTCAGCAATTTCCTCATCCACAGGGCCAGAATCTGGGCGGTTCATCAGGCGGCGCAACGACCCAAACTCCGGCGAGCAGTACTCCGGCACAACCGAGGCAGAGAGTTAGGGCAAAGAGAGGTCACGCAACGGACCCGCACAGCATCGCAGAGAGGTTACGAAGGGAGAGAATCGCAGAGAGAATGAAGGCGCTGCAGGAGCTAGTTCCCAATGCTAACAAGACAGACAAGGCGTCGATGCTGGATGAGATCATCGACTATGTGAAGTTCCTACAGCTTCAAGTTAAGGTATTGAGTATGAGTAGGTTGGGCGGTGCCGCTGCTGTGGCTCCCCTGGTTGCTGATATGGCCTCTGAGGCAGGCGCTGCGGCAGCTGCTGCAGCAGGAGGCGACTGCGTTCAGGCCACAGCCAACGGCAACCAGACGCCGCCGTCAACCTCCAACGACACCATCGCCATGACGGAGCATCAGGTGGCCAAGCTCATGGAGGAGGACATGGGCTCCGCCATGCAGTACCTGCAGGGCAAGGGACTCTGCCTCATGCCAATCTCCCTTGCCACCGCCATCTCCACAGCCGCCTGTCATTCCCGGAGCCACCTCGTCAACAACCACAACCAGAAAGGGCCGTCGTCTCCCAGCATGTCGGTCTTGACCGTGCAGTCGGCGACGGCCGTTAACGGCGCCGCCGAGAGCTCCGTCAAAGAGGGGGTCTCTGTTTCGAAGCCGTGA 1320 0.572 MQPCSREMQRINSLLNSSSQIPLSDLHQIQNSQMHRFDPSSHDDFLDQMLSSLPSSSWPDLNPKPFWDDTPPPPSHAAAENVVFQYDDQASLASKFRNHQISSDDGNLSTKSSTTAALMIQAQQQLLMSRGLAGAGDSGLLPLPLSLGGAGDVDCSRNDVVEGSSFKSPNPGGDSSVQALYNGFTGSLHGGGQVPNQTQQFPHPQGQNLGGSSGGATTQTPASSTPAQPRQRVRAKRGHATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMASEAGAAAAAAAGGDCVQATANGNQTPPSTSNDTIAMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTAACHSRSHLVNNHNQKGPSSPSMSVLTVQSATAVNGAAESSVKEGVSVSKP 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1389 439 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 237 299 IPR036638 GO:0046983
Alju06g1389 439 Gene3D - 234 296 IPR036638 GO:0046983
Alju06g1389 439 MobiDBLite consensus disorder prediction 161 245 - -
Alju06g1389 439 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 239 288 IPR011598 GO:0046983
Alju06g1389 439 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 49 386 - -
Alju06g1389 439 SMART finulus 245 294 IPR011598 GO:0046983
Alju06g1389 439 MobiDBLite consensus disorder prediction 161 230 - -
Alju06g1389 439 FunFam Transcription factor bHLH66 236 301 - -
Alju06g1389 439 Pfam Helix-loop-helix DNA-binding domain 244 289 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1389 Alju-ChrAlju06 15342770 15345731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1389 226 438 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 64.192 1.26e-89 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju06g1389 HLH 1.7e-09 No_clan