Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1371 ATGGGTTTGGGAATATTTGGTTTTTGTTTGGTTCTGACCCTTTTCTTCGACCATTTATCATGCCAGCAACCAAATACCGATGGATTCTTTGTTTCTGAATTCTTGAACAAGACAGGTTCTTCTTCTTCTTATTCAACTTTTTCCAAATCCTACAACTTGTCTGGTTCTTCTTTCTGTTCATGGCAGGGTGTTCTCTGTGATGCTCAAAAAGAACACATTGTGGAGTTTAAAGCTTCTGGGTTAGGCCTCTCTGGGCCTATTCCTGATAATACCATTGGCAAGCTCAACAAGCTTCAATCTTTGGATCTTAGCAGCAACATAATCACTGGTTGGCCTTCAGATTTCTGGAGTTTAACTTCTCTGAAGAGTCTTAACCTTTCTTCCAACCAGATTTCTGGCGCTTTGTCTAACAATATTGGCAATTTTGGTTCATTGGAAACCTTAGACTTATCGAACAACAATCTCTCTGAAGAAATTCCAGAAGCTATAGGCTCTCTTGTCAGTCTTCGCATCCTCAACCTTGGCCGAAACCGGTTCGAACAAACCATACCTTCTGGGATTTTAAAGTGTCTGTCCCTAGTCTCCATTGATCTTTCATCTAATCGTCTAAATGGGACTCTTCCAAAGGGTTTTGGTGCTTCTTTTCCAAAGCTTCAAATGTTGAACCTTGCAGGGAATAGTATCCATGGTCAAGATTTTAACTTTTCTGGGTTGATTTCCATTACTACCCTCAATATGTCTGGAAATTTGTTTCAGGGTTCTGTAATGGGTGCATTTCAGGGAAGCTTGGAGGTCATTGATCTTAGCAAGAACCAATTCCAGGGTCATGTTTCTCAAGTACAATTCGATTCTAACTTCAATTGGTCTCGTTTAATTTATCTGGATTTATCTGAGAATCAGCTTAGTGGTGAAATTTTCCATAATTTGAACGAAGCCCAGAATCTGAAACACCTAAATCTTGCTCACAATAGATTTACCAGACAGAAATTCCCACAGATTAAGATGCTGTCTATGTTGGAAAACTTGAACTTGTCTAGAACTAGTCTTATTGGTGACATTCCTTATGAAATCTCACAACTGAGGCATTTGAATGCTTTGGATATCTCTATGAATCATCTCATTGGGAAAATCCCCTTACTGAGTAACAAAAACCTCCAAATTCTTGACCTTTCTATGAACAATTTGACTGGTCAAATACCCCAATCTCTCTTAGACAAGCTCCCAGGAATGGCCAAGTATAACTTTTCATATAACAACTTCACCTTTTGTGATTCAACATTTACACCTGAAATCCTCAAGATGGCATTCTATGGATCAGTAAACAGTTGCCCAATTGCTGTAAACCCCACAATTTTAAGAAAAAGAGACACTGATCGAAACGGAATGAAGCTGGCTCTTGGATTGACTCTAGCAATGATCTTCCTTCTTGCTGGGCTTTTATTCCTAGCATTTGGCTGTAGAAGGAAGACAAAAATGTGGGCAGTGAAGCAAGCTTCTTACAAAGAAGAACAGAACATCTCAGGACCCTTTGAATTTCAGACTGATTCAACAACCTGGGTGGCTGATGTCAAGCAAGCAACTTCGGTGCCCGTGGTAATTTTCGAGAAGCCATTGTTGAACATCACATTTGCAGACCTCTTGTCTGCAACCTCAAACTTTGATAGAGGTACCCTTTTGGCTGAAGGGAAGTTTGGGCCTGTTTATAGAGGCTTTCTACCTGGTGGGATTCATGTAGCAGTTAAGGTTCTGGTTGTTGGCTCTACATTGACAGATCAAGAAGCTGCGAGGGAGCTCGAGTACCTTGGTCGTATCAAACACCTGAATCTTGTTCCTTTAACTGGTTATTGTCTAGCTGGAGATCAGAGGATTGCTATATATGAATACATGGAAAATGGGAACCTGCAAAACTTGCTCCATGACTTGCCACTTGGGGTGCATAGTCCAGAAGATTGGAGCACAGACACATGGGAGGAAGATGACAATGGTGGTGGGATTCAAAATGCGGGCTCCGAGGGATTGCTCACAGCTTGGAGATTTCGTCACAAGATTGCCCTTGGCACTGCTCGAGCACTGGCCTTTCTTCACCATGGCTGCTCGCCTCCGATCATTCACAGAGATGTCAAGGCTAGCAGTGTTTATCTGGACTACAACCTAGAGCCAAGGTTGTCTGATTTTGGTCTAGCTAAGGTTTTTGGAGATGGCTTGGATGAGGAAATTGCGCTTGGCTCGCCTGGTTATGTTCCACCAGAGTTTTCCCAACCTGAACAGAACTCCCCAACACAGAAATCTGATGTGTACTGTTTTGGGGTTGTGCTGTTTGAGCTGATAACTGGTAAGAAACCTGTTGGGGATGATTATCATGATGAAAAGGAAGAAACTTTGGTTAGTTGGGTTAGAGGACTGGTGAGAAAGAATGAAGCTTCAAGAGCCATTGATCCGAAAATCCGTGAGACGGGTTCAGAAGAACAAATGGAGGAGGCCATCAAGATTGGTTATCTTTGCACGGCTGATCTTCCATTGAAGCGACCGAGCATGCAGCAAGTAGTTGGGCTGCTTAAAGATATTGAGCCTTCTGCAACTTAG 2583 0.422 MGLGIFGFCLVLTLFFDHLSCQQPNTDGFFVSEFLNKTGSSSSYSTFSKSYNLSGSSFCSWQGVLCDAQKEHIVEFKASGLGLSGPIPDNTIGKLNKLQSLDLSSNIITGWPSDFWSLTSLKSLNLSSNQISGALSNNIGNFGSLETLDLSNNNLSEEIPEAIGSLVSLRILNLGRNRFEQTIPSGILKCLSLVSIDLSSNRLNGTLPKGFGASFPKLQMLNLAGNSIHGQDFNFSGLISITTLNMSGNLFQGSVMGAFQGSLEVIDLSKNQFQGHVSQVQFDSNFNWSRLIYLDLSENQLSGEIFHNLNEAQNLKHLNLAHNRFTRQKFPQIKMLSMLENLNLSRTSLIGDIPYEISQLRHLNALDISMNHLIGKIPLLSNKNLQILDLSMNNLTGQIPQSLLDKLPGMAKYNFSYNNFTFCDSTFTPEILKMAFYGSVNSCPIAVNPTILRKRDTDRNGMKLALGLTLAMIFLLAGLLFLAFGCRRKTKMWAVKQASYKEEQNISGPFEFQTDSTTWVADVKQATSVPVVIFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDQEAARELEYLGRIKHLNLVPLTGYCLAGDQRIAIYEYMENGNLQNLLHDLPLGVHSPEDWSTDTWEEDDNGGGIQNAGSEGLLTAWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLAKVFGDGLDEEIALGSPGYVPPEFSQPEQNSPTQKSDVYCFGVVLFELITGKKPVGDDYHDEKEETLVSWVRGLVRKNEASRAIDPKIRETGSEEQMEEAIKIGYLCTADLPLKRPSMQQVVGLLKDIEPSAT 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1371 860 FunFam Putative LRR receptor-like serine/threonine-protein kinase 514 628 - -
Alju06g1371 860 SUPERFAMILY Protein kinase-like (PK-like) 530 852 IPR011009 -
Alju06g1371 860 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 289 422 - -
Alju06g1371 860 SUPERFAMILY L domain-like 57 428 - -
Alju06g1371 860 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 112 207 - -
Alju06g1371 860 Gene3D Ribonuclease Inhibitor 32 184 IPR032675 -
Alju06g1371 860 Pfam Leucine rich repeat 87 131 IPR001611 GO:0005515
Alju06g1371 860 Gene3D Ribonuclease Inhibitor 185 280 IPR032675 -
Alju06g1371 860 FunFam Calmodulin-binding receptor kinase CaMRLK 261 379 - -
Alju06g1371 860 Pfam Leucine Rich repeat 381 397 IPR001611 GO:0005515
Alju06g1371 860 Gene3D Ribonuclease Inhibitor 281 434 IPR032675 -
Alju06g1371 860 ProSiteProfiles Protein kinase domain profile. 553 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1371 860 Pfam Leucine Rich Repeat 144 166 IPR001611 GO:0005515
Alju06g1371 860 Pfam Protein tyrosine and serine/threonine kinase 557 850 IPR001245 GO:0004672|GO:0006468
Alju06g1371 860 SMART LRR_typ_2 118 137 IPR003591 -
Alju06g1371 860 SMART LRR_typ_2 95 117 IPR003591 -
Alju06g1371 860 SMART LRR_typ_2 383 406 IPR003591 -
Alju06g1371 860 SMART LRR_typ_2 238 261 IPR003591 -
Alju06g1371 860 SMART LRR_typ_2 166 190 IPR003591 -
Alju06g1371 860 SMART LRR_typ_2 142 165 IPR003591 -
Alju06g1371 860 ProSiteProfiles Leucine-rich repeat profile. 144 166 IPR001611 GO:0005515
Alju06g1371 860 Gene3D Transferase(Phosphotransferase) domain 1 629 860 - -
Alju06g1371 860 Gene3D Phosphorylase Kinase; domain 1 513 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1371 Alju-ChrAlju06 15054425 15057007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1371 83 856 Receptor kinase-like Gene Family AT4G39400 33.960 9.96e-111 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Alju06g1371 PK_Tyr_Ser-Thr 2.9e-32 CL0016