Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1365 ATGAAGGAGAAGAGAGTGTCTAACATTTACAGGTTGGATGACCTGGACTCTAGGCTCTCTTCATCTTCTGATACTCGAATTAAGAAAAGTGGATTTAGTGTTGAGAAATTAAACCATGGTAGCCATGCAAGCACTGCAACCTCTAGGTCTTTCAAAAGAGGAATGATAAAAGGATCTGAAGGACTGAAGTCAATTGGACGATCACTTGGATTCGGGGTATCTAAGGCAGTATTCCCTGAAGATCTGAAAGTGTCAGAGAAGAAGATATTTGATCCTCAAGACAAATTTTTGCTCCTATTGAATAAACTTTTTGTTGTCTCGTGCATTTTGGCTGTGTCTGTGGATCCATTATTTTTCTATCTTCCTGTCGTCAATGATCCATCCAACTGCCTTGGTATAGATCAGAAAATGGCAATCATTGTCACCACCTTGAGGACGGCTGTTGATGTTTTCTATCTTATACACATGGCTCTTCAATTCCGCACTGCCTATATTGCCCCATCGTCTCGTGTCTTTGGACGGGGGGAGCTTGTAATAGATTCAACACAGATAGCCAAGCGATACTTGCGGCGGTATTTCATTGTTGACTTTCTATCTGTGCTGCCCTTACCACAGATTGTGGTTTGGAGATTTCTTCAAAGATCAAAAGGTTCAGATGTATTAGCAACAAAGCAGGCCTTGCTGTATATTATCTTACTACAGTATGTTCCTAGGTTTCTCCGGATGTTACCACTGACTTCAGAACTTAAGAGAACCGCTGGTGTGTTTGCTGAAACTGCATGGGCAGGTGCTGCATATTATTTGATGTTATACATGCTTGCCAGTCATATAGTTGGGGCTTTTTGGTACTTGTTAGCTGTTGAACGCAATGACGCATGCTGGCAGGAGGCATGCAAGCAACCAAGGTGCAAAAAGGATTTTTTGTATTGTGGTAACCAGCTGATGGACGGTTATAATGACTGGAACAGTACAAGTGATCAAATTCTTAACGAACATTGCTCTACAGAGGACAATTCACCTTTTGATTTTGGAATTTTTAAACAAGCATTGTCATCAGGCATTATTTCATCTAAAAAATTTGTGTCCAAATACTGTTACTGTTTATGGTGGGGGCTCCAGAATTTGAGCACTCTTGGCCAGGGACTTCAAACCAGCACTTATCCTTGGGAAACCATCTTTTCAATAGCACTAGCCATATTTGGTCTTATCCTCTTTGCACTTCTAATTGGTAACATGCAGACCTATCTTCAGTCTATTACCATAAGGCTTGAGGAAATGAGAGTCAAAAGGCGTGATTCCGAACAGTGGATGCATCATCGTTTGCTCCCGCCAGATCTGAGAGAGCGGGTGAGATGCTATGACCAATATAAGTGGTTAGCAACACGTGGTGTGGATGAAGAAAGTTTGGTTCAGACACTTCCAAAGGATCTTAGAAGAGATATCAAGCGTCACCTCTGTCTGGCTTTAGTGACAAGGGTTCCATTGTTTGAGAGCATGGATGAGAGGCTGCTTGATGCCATTTGTGAAAGGCTGAAACCTTGTTTATTTACTGAGAATACTTACATTGTACGGGAAGGAGATCCAGTTGATGAGATGATTTTCATCATTCGTGGTCGGCTCGAAAGTGTTACCACAGACGGTGGTAGAAGTGGATTTTTTAACCACGGTTTCCTTAAAGAGACCGACTTCTGTGGGGAGGAGCTTCTAACCTGGGCACTTGATCCAAAATCTGGTTCTAACCTCCCAACTTCTACTCGTACGGTTAAGGCATTAACTGAGGTTGAGTGTTTCGCCTTAATAGCGGACGAGCTAAAATTTGTTGCTAGTCAGTTTAGGCGCCTTCATAGTAGACAGGTTCAACACACATTCCGGTTCTACTCACAGCAATGGAGGACTTGGGCTGCCTGCTTTATCCAAGCAGCATGGCGGCGATATTCTAAGAGGAAGGCCATGGAGGTTCGTCGAAAGGAAGAGCCCGAGGAGTCAGAAGGATCTCACAGTAATGCTAGTGGTGTTTCATATAGCATTGGTGCTACCTTCTTGGCTTCAAGGTTTGCTGCCAATGCTCTTCGGGGCATACATCGCAACCGCAACGCTAAGACTGCGAGGGAGTTGGTGAAACTACAGAAACCTCCAGAACCCGACTTTAGTGCTGATGCAGATTAA 2166 0.434 MKEKRVSNIYRLDDLDSRLSSSSDTRIKKSGFSVEKLNHGSHASTATSRSFKRGMIKGSEGLKSIGRSLGFGVSKAVFPEDLKVSEKKIFDPQDKFLLLLNKLFVVSCILAVSVDPLFFYLPVVNDPSNCLGIDQKMAIIVTTLRTAVDVFYLIHMALQFRTAYIAPSSRVFGRGELVIDSTQIAKRYLRRYFIVDFLSVLPLPQIVVWRFLQRSKGSDVLATKQALLYIILLQYVPRFLRMLPLTSELKRTAGVFAETAWAGAAYYLMLYMLASHIVGAFWYLLAVERNDACWQEACKQPRCKKDFLYCGNQLMDGYNDWNSTSDQILNEHCSTEDNSPFDFGIFKQALSSGIISSKKFVSKYCYCLWWGLQNLSTLGQGLQTSTYPWETIFSIALAIFGLILFALLIGNMQTYLQSITIRLEEMRVKRRDSEQWMHHRLLPPDLRERVRCYDQYKWLATRGVDEESLVQTLPKDLRRDIKRHLCLALVTRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMIFIIRGRLESVTTDGGRSGFFNHGFLKETDFCGEELLTWALDPKSGSNLPTSTRTVKALTEVECFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKAMEVRRKEEPEESEGSHSNASGVSYSIGATFLASRFAANALRGIHRNRNAKTARELVKLQKPPEPDFSADAD 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1365 721 Gene3D Helix hairpin bin 423 486 - -
Alju06g1365 721 SUPERFAMILY cAMP-binding domain-like 424 614 IPR018490 -
Alju06g1365 721 FunFam Cyclic nucleotide-gated ion channel 1 422 486 - -
Alju06g1365 721 PRINTS EAG/ELK/ERG potassium channel family signature 390 401 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju06g1365 721 PRINTS EAG/ELK/ERG potassium channel family signature 364 381 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju06g1365 721 PRINTS EAG/ELK/ERG potassium channel family signature 156 165 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju06g1365 721 PRINTS EAG/ELK/ERG potassium channel family signature 408 417 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju06g1365 721 PRINTS EAG/ELK/ERG potassium channel family signature 273 283 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju06g1365 721 PRINTS EAG/ELK/ERG potassium channel family signature 458 465 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju06g1365 721 MobiDBLite consensus disorder prediction 702 721 - -
Alju06g1365 721 CDD CAP_ED 495 626 IPR000595 -
Alju06g1365 721 Gene3D Jelly Rolls 493 613 IPR014710 -
Alju06g1365 721 SUPERFAMILY Voltage-gated potassium channels 92 417 - -
Alju06g1365 721 SMART cnmp_10 495 626 IPR000595 -
Alju06g1365 721 ProSiteProfiles cAMP/cGMP binding motif profile. 495 599 IPR000595 -
Alju06g1365 721 Gene3D - 102 420 - -
Alju06g1365 721 Pfam Cyclic nucleotide-binding domain 516 605 IPR000595 -
Alju06g1365 721 Pfam Ion transport protein 100 421 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Alju06g1365 721 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 81 716 - -
Alju06g1365 721 FunFam Cyclic nucleotide-gated ion channel 1 493 611 - -
Alju06g1365 721 ProSiteProfiles IQ motif profile. 631 660 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1365 Alju-ChrAlju06 14977359 14984083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1365 18 719 Ion Channels AT5G57940 78.470 0.0 1131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1365 06 14977359 14984083 Alju06g1365 06 14977359 14984083 ECH