Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1357 ATGAATCCGAACGGCGGCGCCGGCGCCGGCGAAGATATACTACGGAAGATGGAAAGAGAACGAATCAGGCTAGAGATAATCTCCAGCGAGATAACAAGGAAACTGATGCTGGAGAGAGAAATGGCTCTCCGAAGGAGTTTGGGGGAAAGATCCTTGCTTGATGAGCAAGTAGCAAATGGGTTAAGTTTAGATCACAGACCCAACCTGATTCTTCCTCCTTACGATAATCCCAACCCCAAACCTGATCCTCCTAAGACTAACAAGAACATATTGATCATGCTGGAGAAGCCAAACCCAGAAACCTATAGAGAAAAGCGAAAAGCTGCAACAAAAGATGCCGATGATGGTGGTGATGGTACGGAGCATGCTCCTGTTGTTGTAAAGAAAAAGCCAAGGAATGAATGGAACTGTGCGCTTTGTTGTGTTACTGTTACTAGTGAGGGGGCTTTGGACGAACACTTGCAAGGGAAGAAGCACAAGGCTAGGGATTCTGCACAAAAGAAAATGCTGATCAGTACGAGTACAAGTGCTAGCCCTAGCCCATCGTCACCTACATCAAAGAACACCCAACAGTCTCTGAAGCAATCTTTGAAACCTACTGAGACCACCGTTGTTGCTTCAGATATGGAAGTAAAAGCTGATGATGTTCATGCTCAACGTGAAGTGACCAAGGTAGACACAGATCAGACGGTGGTGGTAGGCAAAGATGTTGAGGAAGTCAAAACTGAAGATAAGGAGATTGTGGAGAAAATCCAAAGAACAGAAGATTCAGGGAAGGAAAATGGGACTGAAACAGAACAACCACAGGTAGGAACAATACCAAATAATGCAGTGAACAAAAAAGGGTTCAAGTTTTGGTGTGAACTGTGCAAAGTTGGATCTTCCTCTGTAGCTGTGATGGATAACCATAGGAGGGGGAAAAAACACACCAACCGAGTAAAGAGACTGCATCAAAACAATGATGAGAGTGCTGCATGA 978 0.4489 MNPNGGAGAGEDILRKMERERIRLEIISSEITRKLMLEREMALRRSLGERSLLDEQVANGLSLDHRPNLILPPYDNPNPKPDPPKTNKNILIMLEKPNPETYREKRKAATKDADDGGDGTEHAPVVVKKKPRNEWNCALCCVTVTSEGALDEHLQGKKHKARDSAQKKMLISTSTSASPSPSSPTSKNTQQSLKQSLKPTETTVVASDMEVKADDVHAQREVTKVDTDQTVVVGKDVEEVKTEDKEIVEKIQRTEDSGKENGTETEQPQVGTIPNNAVNKKGFKFWCELCKVGSSSVAVMDNHRRGKKHTNRVKRLHQNNDESAA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1357 325 MobiDBLite consensus disorder prediction 98 127 - -
Alju06g1357 325 MobiDBLite consensus disorder prediction 246 262 - -
Alju06g1357 325 ProSitePatterns Zinc finger C2H2 type domain signature. 137 159 IPR013087 -
Alju06g1357 325 MobiDBLite consensus disorder prediction 154 202 - -
Alju06g1357 325 SMART ZnF_U1_5 282 316 IPR003604 GO:0003676|GO:0008270
Alju06g1357 325 SMART ZnF_U1_5 132 166 IPR003604 GO:0003676|GO:0008270
Alju06g1357 325 Pfam Zinc-finger double-stranded RNA-binding 284 309 IPR022755 -
Alju06g1357 325 MobiDBLite consensus disorder prediction 167 202 - -
Alju06g1357 325 MobiDBLite consensus disorder prediction 246 275 - -
Alju06g1357 325 Gene3D Classic Zinc Finger 127 171 - -
Alju06g1357 325 MobiDBLite consensus disorder prediction 301 325 - -
Alju06g1357 325 SUPERFAMILY beta-beta-alpha zinc fingers 129 166 IPR036236 -
Alju06g1357 325 Pfam Zinc-finger of C2H2 type 135 159 - -
Alju06g1357 325 SUPERFAMILY beta-beta-alpha zinc fingers 273 316 IPR036236 -
Alju06g1357 325 MobiDBLite consensus disorder prediction 64 127 - -
Alju06g1357 325 Gene3D Classic Zinc Finger 264 317 - -
Alju06g1357 325 PANTHER OS06G0651300 PROTEIN-RELATED 12 321 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1357 134 323 C2H2 Transcription Factor Family AT5G61190 22.165 6.64e-06 45.8