Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1344 ATGCAGCAAGGTGATCAAACGGTGTTAAGCTTGAGGCCTGGTGGTGGTCGAGGCGGCGGCGGCGGAAACAGGCTATTCGGTCCTCGATACGAGTCCACGTCATCCGCATCTTCTACTTTCCCTGCCTTTGGATCTTTTTCCTCTGATCTCCCAGTCTTGCGCCCCCATGGCGGTGCTCCTTCGTCATTCTCTATTAAGGCTGGTGATTCACGGTTTGAGGGTCGTGAGCGGGTGCGATACACCAGAGATCAACTGTTACAGCTTAAAGAGGTTGTTGAGGTCCCTGACGATATCATTAAAATCAAACAAGAAATAGAAGCTGAGCTTTTTGGCGAAGATCAAAGCTGGGTTCGTGCGGAAAGCAATCCCCCTCATCAATTTCAGATCCGATATTCTGAGCCAGATAACCGTGACTGGCGTGGCCGGTCTGGACAACTTTCTCCTGCCGAAGAAAGATCTTGGGACAATATAAGGGAGAATAGAGAATTTGGCAACCGATATGACTCAAGACAGCCAGATGCCAGCCAGATTAATCGCCAAGACCAGCCGAGTTTTGCAAAGGGAGGACCTGCTCCTACTCTAGTGAAGGCTGAATTGCCATGGTCAGCTAGAAGGGGAAGTCTTTCTGAGAAGGATCGTGTCTTGAAGACTGTGAAAGGGATTCTAAATAAGTTGACTCCTGAGAAATTTGATCTCCTGAAGGGTCAATTGATTGATGCTGGAATTACATCAGCTGGCATCTTGAAGGATGTCATTTCGCTTATATTTGATAAGGCAGTGCTTGAACCAACGTTTTGCCCCATGTATGCTCTTTTGTGTTATGATCTTAATGAAAAGTTGCCACCATTCCCTTCTGAAGAACCTGGTGGGAAAGAAATCACTTTTAAGAGATTACTCTTAGATAATTGCCAGGAGGCCTTTGAAGGTGATGATAAATTGAGGGAAGAAGTTAGGCAGATGACTACCCCTGAGCAGGAGATGGAGCGCCGTGATAAGGAAAGACTGGTCAAGCTTCGTACTTTGGGAAACATTCGATTAATTGGGGAGCTCTTAAAGCAGAAGATGATTCCTGAAAGAATTGTCCATCACATTGTTCAGGAGCTTTTAGGACCACCTGATAGCAAGGCCTGTCCTGTTGAGGAAAATGTTGAAGCTATATGTCAGTTTTTCAACACTATTGGTAAGCAGCTTGATGAAAGCCCAAAATCACGGCGTATAAATGATATGTACTTCAGCCGATTGAAGGAATTGAGTGCTAATCCTCAACTTGCACCGCGGTTGAGGTTCATGATACGCGATGTTCTAGATTTGCGTACAAATAACTGGGTTCCAAGGCGTGAAGAGGTAAAAGCCAAAACCATCACTGAAATCCATTCAGAGGCTGAAAAAAATCTTGGATTGCGCCCAGGTGCCACTGCTAACATTAGAAATACCCGTAATGTTCAAGGAAATGCCTCTCCTGGAGGATTCCCCATTGCTCGACCTGGTACTGGAGGCATGATGCCTGGAATGCCAGGGACCAGGAAGATGCCAGGGATGCCTGGAATTGATAATGACAATTGGGAGATCCCTAGGAATCGATCAATACCAAGAGGAGATATGCCAGCTGCACAACCAACTGCACGTGGTCAGCCTCCTTTACTTTCCAAGTCAGCAGCCCTGAGCTCGAAGTTGCTACCTCAAGGTAGTGGTGGTTTTATAAGTGGAAGAAGTAGTGCCCTAGTTCATGGAGGTGCTGGTGCTTCTCCCACAATCCCATCAAACTTTGGTTCAGGTGCTGAAGCTCCACCTGTGGAAGTTGCTCCTGCCATGTCCTCTGAGAAGCCACTGTCTCCTGCACCAAAAATGAATACCGATGAACTTCAGCGCAAAACCCAGTCTCTTCTAGAAGAATACTTTAGTGTTAGGCTTTTGGATGAGGCATTACAGTGTGTGGATGAACTAAAGTCCCCTGCTTACCACCCTGAGGTTGTCAAGGAAGCCATTTCCTTGGCGCTAGATAGAAGCCCTCCATGTGTTGAACCTGTTGCCAATCTTCTGGAGTATCTCCTCATTAGAAGGGTTCTTACCGCTAGAGACATAGGCACTGGGTGTTTGCTATTTGCTTCCTTGCTCGACGATATTGGCATAGATTTACCAAAAGCTCCAAACAACTTTGGTGAGATAATCGGGAAACTAGTTTTAGCCGGTGGATTGGATTTTAAGGTGGTGAGAGAGATTCTTAAGAAGGTGGAGGATGACCTGTTCCAGAAAGCCATATTTGATGCTGCAAAACGGGTCATTGCTTCATCATCTGGGCAAGCTGTTTTGGAGTCACAAGCATCTGATATTGAAGCCTGCCAGAGTCTGTTGAAGTGA 2358 0.464 MQQGDQTVLSLRPGGGRGGGGGNRLFGPRYESTSSASSTFPAFGSFSSDLPVLRPHGGAPSSFSIKAGDSRFEGRERVRYTRDQLLQLKEVVEVPDDIIKIKQEIEAELFGEDQSWVRAESNPPHQFQIRYSEPDNRDWRGRSGQLSPAEERSWDNIRENREFGNRYDSRQPDASQINRQDQPSFAKGGPAPTLVKAELPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDAGITSAGILKDVISLIFDKAVLEPTFCPMYALLCYDLNEKLPPFPSEEPGGKEITFKRLLLDNCQEAFEGDDKLREEVRQMTTPEQEMERRDKERLVKLRTLGNIRLIGELLKQKMIPERIVHHIVQELLGPPDSKACPVEENVEAICQFFNTIGKQLDESPKSRRINDMYFSRLKELSANPQLAPRLRFMIRDVLDLRTNNWVPRREEVKAKTITEIHSEAEKNLGLRPGATANIRNTRNVQGNASPGGFPIARPGTGGMMPGMPGTRKMPGMPGIDNDNWEIPRNRSIPRGDMPAAQPTARGQPPLLSKSAALSSKLLPQGSGGFISGRSSALVHGGAGASPTIPSNFGSGAEAPPVEVAPAMSSEKPLSPAPKMNTDELQRKTQSLLEEYFSVRLLDEALQCVDELKSPAYHPEVVKEAISLALDRSPPCVEPVANLLEYLLIRRVLTARDIGTGCLLFASLLDDIGIDLPKAPNNFGEIIGKLVLAGGLDFKVVREILKKVEDDLFQKAIFDAAKRVIASSSGQAVLESQASDIEACQSLLK 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1344 785 ProSiteProfiles MI domain profile. 620 742 IPR003891 -
Alju06g1344 785 MobiDBLite consensus disorder prediction 1 32 - -
Alju06g1344 785 Pfam MIF4G domain 215 441 IPR003890 GO:0003723|GO:0005515
Alju06g1344 785 SUPERFAMILY ARM repeat 614 761 IPR016024 -
Alju06g1344 785 MobiDBLite consensus disorder prediction 169 183 - -
Alju06g1344 785 FunFam Eukaryotic translation initiation factor isoform 4G-2 614 775 - -
Alju06g1344 785 MobiDBLite consensus disorder prediction 127 191 - -
Alju06g1344 785 SMART ma3_7 621 733 IPR003891 -
Alju06g1344 785 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 64 780 IPR045208 GO:0003743
Alju06g1344 785 MobiDBLite consensus disorder prediction 152 168 - -
Alju06g1344 785 SUPERFAMILY ARM repeat 209 444 IPR016024 -
Alju06g1344 785 Gene3D - 613 780 - -
Alju06g1344 785 FunFam Eukaryotic translation initiation factor isoform 4G-2 206 442 - -
Alju06g1344 785 SMART if4_15 215 441 IPR003890 GO:0003723|GO:0005515
Alju06g1344 785 Gene3D - 206 442 - -
Alju06g1344 785 Pfam MA3 domain 621 733 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1344 Alju-ChrAlju06 14586658 14592877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1344 1 783 Eukaryotic Initiation Factors Gene Family AT5G57870 63.795 0.0 958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1344 06 14586658 14592877 Alju06g1344 06 14586658 14592877 ECH