Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1343 ATGGAAGCCAGCGCTGGACTTGTCGCTGGGTCTCACAACCGCAACGAGCTTGTCGTCATTCACGGCCACGAAGAGCCTAAGTGTTTGAAGAATTTGGATGGCCAAGTCTGTGAGATATGCGGTGACGACGTTGGACTCACCGTTGACGGCGACTTGTTTGTGGCCTGCAATGAGTGTGGTTTCCCGGTTTGCCGTCCCTGCTATGAATATGAACGAAGAGAAGGCAGCCAACTCTGCCCTCAGTGCAAGACCAGATACAAGCGTCTCAAAGGAAGCCCTAGGGTGGAGGGAGACGAAGATGAGGAGGACGTGGATGACATTGAACATGAATTCAAGATGGCAGCAGACGAGAAGAACAAGCACAACCATATGGCAGAGGCTATGCTGCATGGCAAGATGAGCTATGGAAGAGGCCCTGAGGATGATGACAATGCTCAATTCCCACCTGTCATCACCGGAAACCGCTCCCGTCCGGTGAGTGGAGAATTCCCAATATCATCTCATGCTTATGGAGACCAGATGCTTTCCTCTTCTCTCCACAAACGCGTTCATCCTTATCCTGTTTCTGAACCTGGAAGTGCAAGAGGGGAGGAGAAGAACGAGGATGGCTGGAAAGATAGAATGGACGACTGGAGACTCCAGCAAGGAAACTTGGGGCCTGAACCTGATGAAGATCCTGATGCAGCCTTGTTGGATGAAGCAAGGCAGCCACTGTCAAGAAAAGTACCAATAGCATCAAGCAAGATAAATCCGTACAGAATGGTGATAGTGGCACGTCTCGTAATTCTGGCCTTCTTCCTCCGATACAGAATAATGAACCCGGTTCATGATGCTCTAGGTCTCTGGCTCACCTCCATTATCTGCGAAATCTGGTTTGCTTTCTCATGGATCCTCGATCAGTTCCCCAAATGGTTCCCGATCGATCGCGAGACCTACCTCGATCGTCTCTCCCTCAGGTATGAGAGGGAAGGGGAGCCGAATATGCTGGCGCCGGTGGATGTGTTTGTGAGTACGGTGGATCCGATGAAGGAACCGCCGTTGGTGACGGGGAACACGATTCTGTCCATATTGGCGATGGATTATCCCGTGGATAAGATATCGTGTTATATATCGGACGATGGAGCTTCCATGTGTACGTTCGAAGCGCTTTCGGAAACGGCGGAGTTTGCGAGGAAGTGGGTCCCGTTTTGTAAGAAGTTCGCGATTGAGCCAAGAGCTCCTGAGATGTACTTCTCTGAGAAGATTGATTACTTGAAAGATAAGGTTCAGCCCACTTTCGTCAAGGAGCGTCGAGCTATGAAGAGAGAATACGAAGAATTCAAGGTGAGGGTGAACGCACTTGTGGCGAAAGCCCAAAAGGTTCCAGCAGGAGGATGGATTATGCAGGATGGGACTCCATGGCCAGGCAACAACACGAAGGACCATCCCGGAATGATCCAAGTGTTTCTAGGTCACAGTGGAGGCTGCGACACCGACGGCAACCTTCTTCCTCGTCTGGTTTATGTATCCAGAGAGAAAAGGCCTGGTTTTTCTCACCACAAGAAAGCTGGTGCCATGAATGCTCTGGTTCGGGTCTCTGCTGTGCTCACAAATGCTCCTTTCATGCTCAACTTGGATTGTGATCACTATGTCAATAACAGCAAGGCTGTCAGAGAGGCCATGTGCTTCTTGATGGATCCCCAAACTGGAAAGAAAGTCTGCTATGTTCAATTCCCTCAAAGATTTGATGGCATTGATAGGCACGATCGTTATGCCAACAGGAACACTGTCTTCTTTGATATTAACATGAAGGGTCTAGATGGTATTCAGGGTCCTGTGTATGTGGGGACGGGATGTGTGTTCAGGAGGCAAGCTTTATACGGATACAATCCTCCAAAGGGTGCTAAACGCCCCAAGATGGTAAGTTGTGATTGCTGCCCCTGTTTTGGACGCCGCAGGAAGCAAAAGTATGCAAAGGATGGCGCAAATGCTGAGTCTGCAATGCTACAACAAGGAATGGAAGATGATAAAGAGTTGCTCATGTCTCAGATGAATTTTGAAAAGAAATTTGGGCAATCATCTATTTTTGTGACTTCAACTTTGATGGAAGAAGGTGGTGTGCCTCCTTCCTCAAGCCCAGCAGCTCTTCTCAAAGAAGCAATTCACGTCATAAGCTGTGGCTATGAGGATAAAACCGAATGGGGAACTGAGCTGGGTTGGATCTATGGATCTATTACTGAGGATATCCTAACAGGTTTCAAGATGCATTGCCGTGGTTGGAGGTCAATTTACTGCGTGCCAAAGTTGCCTGCATTCAAGGGTACAGCTCCAATCAACTTGTCAGATCGGCTCAATCAGGTGCTTCGTTGGGCGCTGGGTTCGATTGAGATCTTCTTCAGTCCCCATTGCCCTGCTTGGTATGGCTACAAGGGTGGCAACAAACTCAAGTGGCTCGAGCGATTCGCCTATGTCAACACCACTGTCTACCCTTTCACTTCTCTTCCTCTAGTTGCCTACTGTATTCTTCCTGCTATTTGCTTGCTCACTGACAAGTTCATCATGCCACCGATAAGCACTTTTGCCGGTTTGTACTTCGTTGCCTTGTTCTCTTCCATCATCGCAACGGGCTTGCTTGAGTTAAAATGGAGTGGAGTAAGCATAGAGGAATGGTGGAGAAACGAGCAATTCTGGGTCATTGGTGGTGTATCAGCACATCTGTTTGCTGTCATACAAGGTCTTCTGAAGGTCCTAGCGGGAATCGACACAAACTTCACTGTTACATCAAAGGCAGCAGATGATGAAGAATTTGGAGAATTATACACCTTTAAATGGACCACTCTCTTAATCCCACCAACCACTATACTAATCATCAATATTGTTGGTGTTGTTGCTGGAATCTCAGATGCAATCAACAATGGCTACCAATCTTGGGGACCCCTATTTGGAAAGCTCTTCTTTTCCTTCTGGGTCATTGTTCATCTCTACCCATTCCTTAAAGGTTTGATGGGAAGACAAAACAGAACACCCACCATAGTTGTGATATGGTCAGTGCTCTTGGCTTCTGTTTTCTCTCTGCTTTGGGTGAGAATTGACCCATTTGTGATGAAAACTAAGGGCCCTGATACCAAGATGTGTGGAATCAACTGCTGA 3129 0.4794 MEASAGLVAGSHNRNELVVIHGHEEPKCLKNLDGQVCEICGDDVGLTVDGDLFVACNECGFPVCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVEGDEDEEDVDDIEHEFKMAADEKNKHNHMAEAMLHGKMSYGRGPEDDDNAQFPPVITGNRSRPVSGEFPISSHAYGDQMLSSSLHKRVHPYPVSEPGSARGEEKNEDGWKDRMDDWRLQQGNLGPEPDEDPDAALLDEARQPLSRKVPIASSKINPYRMVIVARLVILAFFLRYRIMNPVHDALGLWLTSIICEIWFAFSWILDQFPKWFPIDRETYLDRLSLRYEREGEPNMLAPVDVFVSTVDPMKEPPLVTGNTILSILAMDYPVDKISCYISDDGASMCTFEALSETAEFARKWVPFCKKFAIEPRAPEMYFSEKIDYLKDKVQPTFVKERRAMKREYEEFKVRVNALVAKAQKVPAGGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGCDTDGNLLPRLVYVSREKRPGFSHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYVNNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGAKRPKMVSCDCCPCFGRRRKQKYAKDGANAESAMLQQGMEDDKELLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCVPKLPAFKGTAPINLSDRLNQVLRWALGSIEIFFSPHCPAWYGYKGGNKLKWLERFAYVNTTVYPFTSLPLVAYCILPAICLLTDKFIMPPISTFAGLYFVALFSSIIATGLLELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKAADDEEFGELYTFKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASVFSLLWVRIDPFVMKTKGPDTKMCGINC 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1343 1042 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 235 1009 - -
Alju06g1343 1042 SUPERFAMILY RING/U-box 22 105 - -
Alju06g1343 1042 CDD mRING-HC-C4C4_CesA 35 85 - -
Alju06g1343 1042 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 493 623 IPR029044 -
Alju06g1343 1042 MobiDBLite consensus disorder prediction 183 203 - -
Alju06g1343 1042 SUPERFAMILY Nucleotide-diphospho-sugar transferases 346 819 IPR029044 -
Alju06g1343 1042 Coils Coil 430 450 - -
Alju06g1343 1042 FunFam Cellulose synthase 449 623 - -
Alju06g1343 1042 FunFam Cellulose synthase 19 110 - -
Alju06g1343 1042 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Alju06g1343 1042 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 110 IPR013083 -
Alju06g1343 1042 MobiDBLite consensus disorder prediction 133 168 - -
Alju06g1343 1042 Pfam Cellulose synthase 332 1036 IPR005150 GO:0016020|GO:0016760|GO:0030244
Alju06g1343 1042 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1343 Alju-ChrAlju06 14538879 14544912 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1343 1 1042 Cell Wall Biosynthesis AT5G17420 85.043 0.0 1825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1343 06 14538879 14544912 Alju06g1343 06 14538879 14544912 ECH