Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1342 ATGGTGGAGAAATGCATTAGGATGAATAAGGGAAGGAGTGAAATTTTTTGTGTAGTACAAATTGCAGCTTCTCAGTTTTGTAAATGTATCAATGACATGTTTGGCTCAAATTTGCCCATGGATTGGGAAGTAAATCAAACTTGCAGATTTACAGTTTCTCCAGATTCAAATCATTTAACAATAGGGATCTATGGTTCAGTTCTGTATTGGTACAAAGAGAAGAAAAAAAGAAGAACAGCTATAAATGTCAACCCCAACCTTAGTCATCCATACTTGCTCTGCCCTCATTCATCACCTACCATGGAAGCTAGCACAGGACTTTTTGCAGGGTCTCACAACAGCAACGAGCTTGTGGTCATACAACCTGAAGAAGAGCCTAAGCCTGTGAAGAACTTAGATGGTCAGCTATGTGAGATATGTGGTGATTCTGTGGGGTATACAGTGGAAGGAGATTTGTTTGTGGCCTGTGAAGAGTGTGGTTTCCCTGTGTGCAGGCCATGTTATGAGTATGAAAGAAGGGAAGGGACTCAAAATTGCCCTCAGTGCCAGACCAGATACAAGCGAATCAAAGGAAGCCCAAGAGTTGAGGGAGATGAAGATGAAGATGGCATTGATGATATTGAGCATGAGTTCAAAATGGAAGAAGAAAAGTACAAGCTCGTGATAGGCGGTGGAGAAGATGACGACAATGCTACATTACCAGTAGGAATAGCCAAGGTGAATGGAGAGATTCCCAATGGAAATGCAAAGTTGGATGGAAAGACAGAGATAACAGAGGACTGGAAGATGCACCAAGGCAATCTGTGGCCTGAAACTGATGCATCAGTTGATCCTGAAAAGGCCGTGAGAGAAGAAGCTAGACAGCCACTCTCAAGGAAAGTAGCAATACCATCAGGCAGACTCAGCCCTTACAGGATGACGGTCGCGGCTCGGCTTGTGATTCTATTATTGTTCCTTCAGTACAGAGTCCTACACCCAGTGCCTGACGCAGTTGGACTCTGGCTTACATCTGTAATATGTGAAATATGGCTTACATTGTCATGGATAATAGATCAGATTCCGAAATGGTTTCCCATTGACCGGGAGACATACCTTGATCGCCTTTCACTCAGGTTTGAACCAGAGAACAAGCCAAATTTGTTTCCTCCAGTAGATGTCTTTGTCACTACTGTGGATCCAATCAAGGAACCGCCATTAGTTACGGCTAATACTGTTCTTTCAATCTTGGCCATGGATTACCCTGCTACTAAAATCTCATGCTATGTTTCTGATGATGGAGCTTCCCTGCTCACCTTTGAAGCTCTCCAAGAAACTGCAGAGTTTGCACGGAAGTGGGTGCCCTTCTGCAGAAAATATTCTCTAGAGCCACGTGCACCAGAGAAGTACTTCTCTGAGAAGATTGATTTTCTAAAGGATAAGGTCCAGTCTACTTATGTCAGAGACCGCCGTACTATGAAGAGAGAATATGAAGAATTCAAGGTCAGGATAAATTCACTCGTGGCTAAATCCATGAGAGTTCCCCAAGAAGGGTGGACTATGCAAGATGGAACACCATGGCCCGGAAACAATACCAATGATCACCCAGGTATGATACAAATTCTTCTTGCTCGGAGTGGAGGCGTTCAAGGAAATGAACTTCCGTGTCTTGTCTACCTGTCTCGTGAGAAAAGGCCAGGGTTTCAACACCACAGCAAAGCTGGTGCCTTGAATGCATTGCTTCGGGTATCTGCATTGTTAAGCAATGCTCCTTTTGTGCTGAACTTGGATTGCAATCACTATGTCAACAATAGCAAGGCTGTAAGAGAGGCCATGTGTTTCTTCATGGACCTACAATTTGGAAAGAGCATATGCTTTGTCCAGTTCCCGCTAAGATTTGACAGCCTCGATAAGCATGATCGTTATGCCAACAGAAATACTGTTTTATTTGATATAAACTTGAGGTGCCTTGATGGAATTCAAGGACCTATTTATATTGGTTCAGGATGTATCTTCCGGAGGAAAGCTTTAAATGGCAGTGAACCTCCGAAGACTTCAAAGCGCCCAAAAATGGTAGGCTGTGGATGCTGTCCTTGTTTTGGATCACGCAAGAAGCTACAAGTGCACTCTAAGCATGATGATGGCAATGAAGATGAGCCAACCATGACAGGAACAGATGAAGACAAGCAGCTTTTAACATCAGAGATGAATTTTGAAAATAAATTTGGGAAATCTGCAGTTTTTGTGAACTCTTCCATAACTGAAGAGGGTGGTATTCCTTCCACCTCTAATCAGGCAGCCTTGCTTAAAGAAGCCATTCATGTCATGAGTAGCCGCTACGAAGACAGAACCCTATGGGGATACGAGGTCGGTTGGAACTATGGATCCATATCATCAGATATTCTGACAAGTTTTAAAATGCACTCTCTTGGTTGGAGATCTGTGTACTGCATGCCAGAAAGACCTGCTTTCAGGGGTACTGCTCCTATCAACCTTTCAGATAGACTCAGTCAAGTGCTAAGATGGGCAGTTGGATCACTTGAGATACTTTTCAGCCACCACTGCCCAATATGGTTTACCTTAGGAGAAGGAAAACTCAAGGGGCTTCAAAGAATTGCCTATATCAACAGCACAGTCTACCCTTTCAGCTCAATACCCCTTATAATATATTGTCTCCTTCCTGCCGTCTGCCTGCTCACAGACAAGTTTATCACACCCTCGATAAGTACCTTTGCAAGTCTTCTCTTCATTGCACTGTTCATATCAATCTTTGCATCAAGCATTCTTGAGTTGAGATGGAGTGGAGTTACTCTTGAGGAATGGTGGAGAAATGAGCAATTCTGGGTTATCGGCAGCATCTCAACGCATCTCTTTGCAATAGTGAGAAACTTTCTGAAGGCTGTGTCTAAAGTTGACATTAACTTCAGTGTCGTATCAAAAATACCAGATGATGGGGAGTTCCATGACCTGTACACCTTTAGATGGACAGCCCTGCTAATACCTCCAACCACTATCATAATCATCAACCTTGTTGGTATTGTAGCTGGGTTTACAGATGCCATAAACAGTGGTGGACAATCTTGGGGAGCATTACTTGGGAAACTCTTCTTCTCCTTCTGGGTTCTGGTCCATCTATACCCATTCCTCAAAGGAATGATGGGTAAACAAAACCGAACACCAACCCTTGTTATCATATGGTCAGTGCTTTTGGCTTCTATCTTCTCCTTGCTTTGGGTAAGAATCGATCCTTTTGTGTTGAAAACAAAAGGGCCTGACGTTAAACAGTGTGGAATCAGTTGCTGA 3279 0.4337 MVEKCIRMNKGRSEIFCVVQIAASQFCKCINDMFGSNLPMDWEVNQTCRFTVSPDSNHLTIGIYGSVLYWYKEKKKRRTAINVNPNLSHPYLLCPHSSPTMEASTGLFAGSHNSNELVVIQPEEEPKPVKNLDGQLCEICGDSVGYTVEGDLFVACEECGFPVCRPCYEYERREGTQNCPQCQTRYKRIKGSPRVEGDEDEDGIDDIEHEFKMEEEKYKLVIGGGEDDDNATLPVGIAKVNGEIPNGNAKLDGKTEITEDWKMHQGNLWPETDASVDPEKAVREEARQPLSRKVAIPSGRLSPYRMTVAARLVILLLFLQYRVLHPVPDAVGLWLTSVICEIWLTLSWIIDQIPKWFPIDRETYLDRLSLRFEPENKPNLFPPVDVFVTTVDPIKEPPLVTANTVLSILAMDYPATKISCYVSDDGASLLTFEALQETAEFARKWVPFCRKYSLEPRAPEKYFSEKIDFLKDKVQSTYVRDRRTMKREYEEFKVRINSLVAKSMRVPQEGWTMQDGTPWPGNNTNDHPGMIQILLARSGGVQGNELPCLVYLSREKRPGFQHHSKAGALNALLRVSALLSNAPFVLNLDCNHYVNNSKAVREAMCFFMDLQFGKSICFVQFPLRFDSLDKHDRYANRNTVLFDINLRCLDGIQGPIYIGSGCIFRRKALNGSEPPKTSKRPKMVGCGCCPCFGSRKKLQVHSKHDDGNEDEPTMTGTDEDKQLLTSEMNFENKFGKSAVFVNSSITEEGGIPSTSNQAALLKEAIHVMSSRYEDRTLWGYEVGWNYGSISSDILTSFKMHSLGWRSVYCMPERPAFRGTAPINLSDRLSQVLRWAVGSLEILFSHHCPIWFTLGEGKLKGLQRIAYINSTVYPFSSIPLIIYCLLPAVCLLTDKFITPSISTFASLLFIALFISIFASSILELRWSGVTLEEWWRNEQFWVIGSISTHLFAIVRNFLKAVSKVDINFSVVSKIPDDGEFHDLYTFRWTALLIPPTTIIIINLVGIVAGFTDAINSGGQSWGALLGKLFFSFWVLVHLYPFLKGMMGKQNRTPTLVIIWSVLLASIFSLLWVRIDPFVLKTKGPDVKQCGISC 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1342 1092 FunFam Cellulose synthase 120 210 - -
Alju06g1342 1092 Pfam Zinc-binding RING-finger 127 203 IPR027934 -
Alju06g1342 1092 SUPERFAMILY Nucleotide-diphospho-sugar transferases 396 915 IPR029044 -
Alju06g1342 1092 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 373 473 IPR029044 -
Alju06g1342 1092 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 512 673 IPR029044 -
Alju06g1342 1092 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 210 IPR013083 -
Alju06g1342 1092 ProSiteProfiles Zinc finger RING-type profile. 137 183 IPR001841 -
Alju06g1342 1092 Pfam Cellulose synthase 384 1086 IPR005150 GO:0016020|GO:0016760|GO:0030244
Alju06g1342 1092 CDD mRING-HC-C4C4_CesA 135 185 - -
Alju06g1342 1092 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 287 1059 - -
Alju06g1342 1092 SUPERFAMILY RING/U-box 122 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1342 Alju-ChrAlju06 14532095 14538757 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1342 101 1092 Cell Wall Biosynthesis AT5G17420 67.638 0.0 1451