Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1333 ATGGGTTTATGTAGATTTTCCTTGTTTGCTTTTTTCTCTGTGGGCGTTATTCATTTATTAGGAGCTCATGGGGAAGGAAAAGCTGACCTTGTGAGTGATAAAAGTTCTCTGATATCATTCATGAGAGGCATTGTTTCTGACCCAAAGAACACTCTAGCAAGCTGGAAATCTCCAGAAATTCATGTCTGTGATTGGTCAGGCATAAGATGCAACAATGCAAGTGATAGAGTCATAGAGATTGATCTCAATGGGAAATCACTAGGAGGCACAATTTCCCCTGCTATTTCCAACCTCTCTTCCTTGAAAATTCTTGATCTTTCTGAGAATTTCTTTGTGGGTCACATTCCAAAAGAGTTAGGCTTCTTAACTCAACTAGGGCAACTCAGTTTTTCTTGGAATTTCCTTGAAGGAGAAATCCCAGCTGAGATGGGTTCACTTCATAACTTATACTACCTTGACTTGGGAAGCAACCAGCTTCATGGTGAGATTCCAGCTTCACTTTTCTGTAATGGGTCTTCCTCATTGAGGTATATAGACCTCTCTAACAATTCCTTAGGGGGTCATATACCATTGAACAATGAGTGTATGCTTTTAGAGGTTAGGTTCCTCTTACTTTGGTCTAATAAGCTAGTTGGCCAAATTCCTCTAGCTCTTTCTAACTCCACACAGCTCAGATGGCTTGATTTGGAGTCAAATATGCTGAGTGGAGAGTTACCACATGAGATTGTAAGTTGGCCTGAACTACAGTTCCTTTATTTGTCAGATAATGACTTTGTTAGCCATGATGGAAACACCAACCTTGAACCTTTCTTTTCTTCTTCGACAAATTTATCTAACCTTCAAGAACTTGAATTAGCAGAAAACAATCTTGGTGGGAATCTTCCTTCTAACATTGGTGATCTTCCTAAAAGCCTTGTACAGCTTCACCTTGATAACAATCTCATTTATGGCCCTATTCCTCCTCAAATATCCAACCTTGTTAACCTGACTCTTCTGAATTTTTCCAGTAATCTACTAAATGGTTCTATCCCTCCTAGCCTATGCAAGATGGGAAAGCTTGAGAGAATCTTTTTGTCCAATAATTCACTCTCTGGTGAGATTCCTTCAGCACTTGGTGGCATTCAACATCTGGGCCTTTTAGACTTGTCAAGAAACAAGCTTTCTGGTTCTATACCAGATAGTTTTGCTAACCTTCCTCAGTTAAGAAGGCTTTTGCTTTATGAAAACCAGCTTTCTGGAACAATCCCGCCGAGTCTTGGCAAATGCGTCAATTTGGAGATTTTGGACCTATCAAGAAACAGAATTTCTGGGGTGATTCCTACTGAAGTTGCCGCCTTGACTAGCTTGAAACTATACTTGAACTTATCAAGCAACAACTTGAATGGCCCTTTACCATTAGAGCTCAGCAAAATGGACATGGTGCTAGCTATTGATTTATCTAACAACAATCTCTCAGGCAGTATCCCGCCTCAGCTTGAAAGCTGCATAGCTTTAGAATACCTTAACCTTTCTGGCAACTCCTTAGAGGGCCCTCTTCCTTTTTCATTTGGCCAATTGTCTTACATAAAGGCACTTGATGTCTCTTCAAATAGGTTAACTGGGGTGATACCGGAGTCCCTTCTGTTATCATCCACTCTGAAGAAACTCAATTTCTCCTTCAACAAGTTCTCAGGGAATATACCAAACAAGGGAGCAATTTCATCTCTCACCATGGACTCTTTCCTAGGAAATGATGCTCTATGTGGTTCCATAAAAGGGATGCAAAGCTGCCACAAGAAACACAGCTATCATTTTGTTCTCCTTATAACTCCTGTGTTTCTATTTGCCACTCCCCTCTTGTGCTTGTTTGGCTACCGGTTGGCGCGCTGGGAGAAATTTCAAAGGCGAATGGTGATATTTGGCAGAAAAAACTATGAGAATGATGAAGAGGAAACAGAGGAGCTAAAGTACCCAAGCATTTCATATAAACAACTTATTGAAGCCACTGGAGGCTTCAGTTCTTCAAGCTTAATTGGTTCAGGAAGATTTGGGCATGTCTACAAAGGAGTCCTTAGAGATAACACCAGAATAGCAGTGAAGGTGTTAGATACCACCACAGCATGTGAATTTTCAGGGAGTTTTAAAAGAGAGTTTCAAATTTTGAAAAGGACTAGGCACAGAAACTTGATAAGGATCATCACAATTTGCAGCAAGCCAGAGTTTAAGGCTCTTGTTCTTCCTTTAATGCCAAATGGAAGCCTTGAGAGGCACCTATATCCAAGCCATGGGTTGAGCCACAGGTTAAATTTAGTTCAGATAGTGAGGATTAGCGGTGATGTGGCTGAAGGAATGGCCTATTTGCACCATTACTCACCAGTAAGAGTGATCCACTGTGATCTCAAGCCAAGCAATATACTTCTCGACCATGATATGACAGCTTTGGTTACTGATTTTGGAATTGCAAGGCTTGTGAAAGGTGATGAGAGTATGGCTTCGAATAATAGCTCAGCATCTTTCAGTTCAACACATGGCTTGTTGTGTGGTTCTCTTGGCTATATAGCCCCTGAGTATGGAATGGGGAAAAAAGCATCAACCCAAGGTGATGTATACAGTTTTGGAGTATTACTACTAGAAATAGTGACAGGTAGGCCTCCCACAGATGTTCTTGTCCATGAAGGCTCAAGTTTGCATGAGTGGGTAAAGAGACAATACCCATATAAGCTAGACAACATTGTTGACAAGGCATTACAAAGGTTGTCACATTATTCTGGTCAACATGACAGCAACAAAATCTGGAAAGATGTTGTACTTGAACTCATAGAACTGGGACTTCTCTGCACACAGTATAATCCTTTCACAAGGCCTAGCATGTTGGATGTGGCTCAAGAAATGGGCAGGTTGAAGGATTACTTGTGTAATAATCCATCTTCCTCTTTGCTAATTGGTGAAGCTGTCAACTCTAAGGTTAATGATTTTTTTCGTAGTGAAGATAATTTACTTGAAAAGTAA 2988 0.4063 MGLCRFSLFAFFSVGVIHLLGAHGEGKADLVSDKSSLISFMRGIVSDPKNTLASWKSPEIHVCDWSGIRCNNASDRVIEIDLNGKSLGGTISPAISNLSSLKILDLSENFFVGHIPKELGFLTQLGQLSFSWNFLEGEIPAEMGSLHNLYYLDLGSNQLHGEIPASLFCNGSSSLRYIDLSNNSLGGHIPLNNECMLLEVRFLLLWSNKLVGQIPLALSNSTQLRWLDLESNMLSGELPHEIVSWPELQFLYLSDNDFVSHDGNTNLEPFFSSSTNLSNLQELELAENNLGGNLPSNIGDLPKSLVQLHLDNNLIYGPIPPQISNLVNLTLLNFSSNLLNGSIPPSLCKMGKLERIFLSNNSLSGEIPSALGGIQHLGLLDLSRNKLSGSIPDSFANLPQLRRLLLYENQLSGTIPPSLGKCVNLEILDLSRNRISGVIPTEVAALTSLKLYLNLSSNNLNGPLPLELSKMDMVLAIDLSNNNLSGSIPPQLESCIALEYLNLSGNSLEGPLPFSFGQLSYIKALDVSSNRLTGVIPESLLLSSTLKKLNFSFNKFSGNIPNKGAISSLTMDSFLGNDALCGSIKGMQSCHKKHSYHFVLLITPVFLFATPLLCLFGYRLARWEKFQRRMVIFGRKNYENDEEETEELKYPSISYKQLIEATGGFSSSSLIGSGRFGHVYKGVLRDNTRIAVKVLDTTTACEFSGSFKREFQILKRTRHRNLIRIITICSKPEFKALVLPLMPNGSLERHLYPSHGLSHRLNLVQIVRISGDVAEGMAYLHHYSPVRVIHCDLKPSNILLDHDMTALVTDFGIARLVKGDESMASNNSSASFSSTHGLLCGSLGYIAPEYGMGKKASTQGDVYSFGVLLLEIVTGRPPTDVLVHEGSSLHEWVKRQYPYKLDNIVDKALQRLSHYSGQHDSNKIWKDVVLELIELGLLCTQYNPFTRPSMLDVAQEMGRLKDYLCNNPSSSLLIGEAVNSKVNDFFRSEDNLLEK 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1333 995 SMART serkin_6 665 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1333 995 ProSiteProfiles Protein kinase domain profile. 665 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1333 995 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 379 957 - -
Alju06g1333 995 Gene3D Ribonuclease Inhibitor 264 598 IPR032675 -
Alju06g1333 995 SUPERFAMILY L domain-like 41 261 - -
Alju06g1333 995 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Alju06g1333 995 SUPERFAMILY L domain-like 264 368 - -
Alju06g1333 995 Pfam Leucine Rich Repeat 498 518 IPR001611 GO:0005515
Alju06g1333 995 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Alju06g1333 995 SUPERFAMILY L domain-like 335 582 - -
Alju06g1333 995 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 742 969 - -
Alju06g1333 995 SUPERFAMILY Protein kinase-like (PK-like) 644 955 IPR011009 -
Alju06g1333 995 Gene3D Ribonuclease Inhibitor 198 263 IPR032675 -
Alju06g1333 995 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 196 - -
Alju06g1333 995 SMART LRR_typ_2 326 350 IPR003591 -
Alju06g1333 995 SMART LRR_typ_2 146 170 IPR003591 -
Alju06g1333 995 SMART LRR_typ_2 98 122 IPR003591 -
Alju06g1333 995 SMART LRR_typ_2 277 301 IPR003591 -
Alju06g1333 995 SMART LRR_typ_2 398 422 IPR003591 -
Alju06g1333 995 SMART LRR_typ_2 374 397 IPR003591 -
Alju06g1333 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Alju06g1333 995 Pfam Leucine rich repeat 352 411 IPR001611 GO:0005515
Alju06g1333 995 Gene3D Transferase(Phosphotransferase) domain 1 742 970 - -
Alju06g1333 995 Gene3D Phosphorylase Kinase; domain 1 635 740 - -
Alju06g1333 995 Gene3D Ribonuclease Inhibitor 31 197 IPR032675 -
Alju06g1333 995 Pfam Protein kinase domain 667 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1333 995 CDD STKc_IRAK 671 960 - -
Alju06g1333 995 FunFam Leucine-rich repeat receptor-like protein kinase TDR 274 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1333 Alju-ChrAlju06 14405833 14409441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1333 32 962 Receptor kinase-like Gene Family AT3G47110 35.449 4.06e-152 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju06g1333 Pkinase 5.1e-43 CL0016