Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1309 ATGTCCCTCACCATTTTCATGCTGTGTTTATTCCTAAACACAGCATACTCCGACAAGAACATGATTATTGATGATGACGGATTCACGTTTGATGGTGGATACTTCAAGTTAGGACCAGGCAGTGATCAATTGCTCAAAAATTCCAACATGTCCCGACAAGTAATACGCGCCGATAGTGGTCTAAGTGAAGCATGGCAAGTCTTTTACAATCTTCCTCTTCAATTCAAGAATTCCAATAATACTACTACTACTTCTTCTTCTTATGTCTCCTCTTTCTCTACCACTTTTATCTTTGCAATAATAGCCACCGATTCTAAATTTCATGGCCATGGACTCGCCTTTGCTTTCTCGCCTACCAGATTTATTCCTGAAGCTCAGCCAAACCAATATCTTGGCCTATTTAATGCCACCTCCAACGGTGAAAGTTCCAATCATATTGTGGCAATAGAACTTGACACTGACCTGGATTTTCAGTTTCATGATATTGATGAAAACCATCTTGGGATTGATATCAATGAATTGGTCTCTGTCAATGAATCTTCTGCAGGTTACTATACTGATCGTGGTCGTTTTGTAAAGCTTGATCTTACAAGTGGAGAACCCATGCAGGTTTGGATTGAATACAATAGTACAGATCAGAAACTTAGCGTCACAATTCATCCAATAAACATACCTAAACCTGAAATCCCTCTTCTCACGCTGAAAAGAGATCTTTCTTCTTATTTCTTTGAGTTTATGTATGTTGGATTCTCATCCTCTAGTGGGTCCTATTCGTCTCATTACATATTGGGTTGGAGTTTCAGGATGAATGGTCAAGCTGAGCAGATTAATCTTTCTCGCCTTCCTAACATTCCTGGATTTGTAGATCCAAATAAAAGGGTTGGAGGAGGGAAAGTATATAAGAAAATATTGATAGTTGTATTATCATCACTGGTCTGTGTGGCTATCCTTTTAATCTTGATTTATGGTGTGATTATGATTGGAAGGAGGAGAAAATTCATTCAAGTTCTTGAAGATTGGCAAGTATTGTATGGGCCTCATAGGTTCACTTACAAGGACTTGTTCATTGCAACAAAAGGGTTTAGAAAGGGACAGCTTTTAGGAAGAGGGGGTTTTGGCGGAGTATACAAAGGAATCCTACCATTTTCCAATGTCCAAATTGCAGTGAAGAGGATCTCTCATGATTCAAGACAAGGAATGAGAGAATTCGTTGCAGAAATCGCGACCATAGGCCGGCTCCGGCATCGAAATTTGGTAAGACTTCTTGGTTATTGCAGAAGAAAAAATGAACTCTTGTTGGTTTATGACTTCATGCCTAATGGAAGCCTAGACAAGTTCCTTTACCGTCTTCCCAACAACAAAATTCTCAGCTGGAAACAAAGATTCAAGATCATCAAAGATGTTGCATCTGCACTTTTATATCTTCACCAGCAATGGGTTCAAGTTGTTATCCACAGAGACATCAAACCAGCTAATGTACTGATTGATAATGACATGAATGCTAGACTCGGAGATTTTGGCCTCGCCAAGCTATGCGACCATGGAAATGATCCTCAAACATCTCATGTAGCAGGAACTCCTGGCTACATAGACCCGGAAATTGTGCAGAGTGGAAAATCAAACACATGTACTGATATATATTCATTTGGTGTGTTTCTGCTGGAGATTGCTTGCGGAAGAAGGCCAATCGAAACTCAGACTTCGCCAGAGAAAGTGGTGCTGATAGAATGGGTTACAGAGTGCTGGGAAAAAGGAGAGATTTGTGAGGCTGTTGATAGCAGATTGGGTGATGAATATGTGGTGGAAGAGGCTGAATTGGTGCTCAAACTTGGGTTGCTTTGTTCACATCCTATTGCTTCAGCGAGGCCTACTATTTCTAGTATTGTGAAATATTTAGATGGAGATTCTGAGTTGCCTCATAACTTGTTGGATTTAATTAAGTCTAGAAATTTCGGTGGCTGGTCAGTTCAAGCATGTTCTTCATCTTCCTCTGATTTTCCTACTGTCCATACTTCTGTTGCTTTGACTTTTACGGAACCATTTGACTCCTCCGGCCGCTAA 2061 0.4027 MSLTIFMLCLFLNTAYSDKNMIIDDDGFTFDGGYFKLGPGSDQLLKNSNMSRQVIRADSGLSEAWQVFYNLPLQFKNSNNTTTTSSSYVSSFSTTFIFAIIATDSKFHGHGLAFAFSPTRFIPEAQPNQYLGLFNATSNGESSNHIVAIELDTDLDFQFHDIDENHLGIDINELVSVNESSAGYYTDRGRFVKLDLTSGEPMQVWIEYNSTDQKLSVTIHPINIPKPEIPLLTLKRDLSSYFFEFMYVGFSSSSGSYSSHYILGWSFRMNGQAEQINLSRLPNIPGFVDPNKRVGGGKVYKKILIVVLSSLVCVAILLILIYGVIMIGRRRKFIQVLEDWQVLYGPHRFTYKDLFIATKGFRKGQLLGRGGFGGVYKGILPFSNVQIAVKRISHDSRQGMREFVAEIATIGRLRHRNLVRLLGYCRRKNELLLVYDFMPNGSLDKFLYRLPNNKILSWKQRFKIIKDVASALLYLHQQWVQVVIHRDIKPANVLIDNDMNARLGDFGLAKLCDHGNDPQTSHVAGTPGYIDPEIVQSGKSNTCTDIYSFGVFLLEIACGRRPIETQTSPEKVVLIEWVTECWEKGEICEAVDSRLGDEYVVEEAELVLKLGLLCSHPIASARPTISSIVKYLDGDSELPHNLLDLIKSRNFGGWSVQACSSSSSDFPTVHTSVALTFTEPFDSSGR 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1309 686 ProSiteProfiles Protein kinase domain profile. 361 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1309 686 SUPERFAMILY Protein kinase-like (PK-like) 343 645 IPR011009 -
Alju06g1309 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Alju06g1309 686 Gene3D Phosphorylase Kinase; domain 1 346 437 - -
Alju06g1309 686 Gene3D - 28 283 - -
Alju06g1309 686 FunFam Lectin-domain containing receptor kinase A4.3 346 437 - -
Alju06g1309 686 Gene3D Transferase(Phosphotransferase) domain 1 438 645 - -
Alju06g1309 686 PANTHER - 53 636 - -
Alju06g1309 686 Pfam Protein kinase domain 362 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1309 686 SUPERFAMILY Concanavalin A-like lectins/glucanases 65 286 IPR013320 -
Alju06g1309 686 CDD STKc_IRAK 367 634 - -
Alju06g1309 686 Pfam Legume lectin domain 64 281 IPR001220 GO:0030246
Alju06g1309 686 SMART serkin_6 361 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1309 686 FunFam L-type lectin-domain containing receptor kinase S.4 438 644 - -
Alju06g1309 686 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
Alju06g1309 686 CDD lectin_legume_LecRK_Arcelin_ConA 24 271 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1309 Alju-ChrAlju06 14066813 14068999 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1309 66 686 Receptor kinase-like Gene Family AT4G29050 57.348 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Alju06g1309 Pkinase 2.6e-48 CL0016