Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1307 ATGCCTTTCAATTCAGTCGTTCTGCTTCTCCTCCTCCTCCTCTTCCTCTCCTCTGCTGGACTTTGTTTCTCTTCTGAGCCTCGCAACCATGAAGTGGAGGCTTTGATGAGCATAAGAAATGCTCTGACTGACCCGCATGGAGTTTTAAGCAACTGGGATGAGTACTCCGTGGACCCTTGCAGTTGGGCTATGATCACCTGTTCTGCTGATTCCCTTGTCATAGGCCTGGGAGCTCCTAGCCAATTTCTTTCTGGAACTCTATCAGGAGCAATTGCAAATCTGACCAATCTTCGACAAGTTTTACTTCAGAACAACAATATCTCTGGCAAAATCCCACGGGAGCTTGGTACCCTTCCTAAGCTTCAAACTCTTGATCTTTCCAATAATCGATTCACGGGGGTTATTCCTGGGTCTCTGAGTCAGTTGAATAGTCTCCAGTACCTGAGGCTGAACAACAATAGTTTGTCTGGGCCATTTCCTGTGTTACTGTCCAAAATCCCGCAGCTTTCTTTCTTAGACTTGTCTTACAACAATCTCAGTGGACCAATACCCAAATCTCTAGCCAGAACATTCAACGTTGTTGGAAACCCCTTAATATGTGGAAGCAGTTCTACTGAAGGTTGCTATCGATCTGCAACCATCTCACCTGTTCCTTTCACTCTAACATTTTCACAAGGAAATCACAAGTCCAAGAAGCTAGCAATTGCACTTGGGGTCAGTCTTAGCTTTGCTAGCATCATACTCCTGTCTTTTGGGATCTTATGGTACAGAAAGAGACGCCAAGCCATCTTGTACATCAATGGTTATCAAGAAGAGGGACTTGTTAGATTGGGAAATCTCAAAAGTTTCACTTTCAGAGAGCTCCAACATGCAACAGATAATTTCTGCTCCAGAAACCTACTTGGAGCAGGAGGTTTTGGCAATGTCTATCGGGGGAGGCTTGGAGATGGGACAATGGTGGCAGTGAAAAGGCTGAAGGATGTCAGTGGAAGTGCTGGGGAATTACAATTTCAAACAGAACTGGAGATGATCAGCTTGGCAGTTCACCGTAATTTACTTCGCTTAATTGGATTTTGTGCTACTCCTAATGAAAAGCTTCTGGTTTATCCTTATATGTCTAATGGCAGTGTGGCTTCCAGGCTCAGAGGCAAACCTTCTTTGGACTGGAACACAAGGAAGAGGATTGCCATTGGAGCCGCCAGAGGTCTTCTGTATCTTCATGAGCAATGTGATCCAAAGATAATACATAGAGATGTAAAGGCTGCTAATGTGCTTCTGGATGACTATTTTGAGGCCGTTGTCGGTGATTTTGGGCTTGCAAAGCTCCTTGACCATGCTGACTCTCATGTCACAACTGCTGTCCGTGGCACTGTCGGGCACATTGCACCAGAATACCTCTCCACTGGCCAATCTTCGGAGAAGACTGATGTATTTGGATTTGGCATTCTCTTGTTGGAGCTTATAACTGGAATGACAGCCCTTGAGTTTGGGAAAACAGTTAATCAAAAGGGAGCTATCCTAGAGTGGGTTAAGAAAATACAACATGAAAAGAAACTTGAAGTATTGGTGGACAAAGAGCTAGGCAGTCACTATGACTGGATAGAGGTGGGGGAGATGTTGCAAGTAGCTCTGCTCTGCACTCAATATTTGCCTGCCCACCGCCCTAAGATGTCTGAAGTGGTCCGGATGCTTGAAGGCGATGGCCTCGCCGAGAAATGGGCAGCATCACATAATCACGGGAGCTTCAGCATAAGCTCCTTTCACAGCAACAACAGCAACAGTTCATCATCCTGTCCTACCACTACTGCTTCAAATTCAAAGCACGATCGTTCCCACATGTTTGGCAAGGCAGTGGATGATGACGATGACGGACATTCTTTGGATTCCTACGCCATGGAGCTCTCTGGTCCAAGATGA 1917 0.4575 MPFNSVVLLLLLLLFLSSAGLCFSSEPRNHEVEALMSIRNALTDPHGVLSNWDEYSVDPCSWAMITCSADSLVIGLGAPSQFLSGTLSGAIANLTNLRQVLLQNNNISGKIPRELGTLPKLQTLDLSNNRFTGVIPGSLSQLNSLQYLRLNNNSLSGPFPVLLSKIPQLSFLDLSYNNLSGPIPKSLARTFNVVGNPLICGSSSTEGCYRSATISPVPFTLTFSQGNHKSKKLAIALGVSLSFASIILLSFGILWYRKRRQAILYINGYQEEGLVRLGNLKSFTFRELQHATDNFCSRNLLGAGGFGNVYRGRLGDGTMVAVKRLKDVSGSAGELQFQTELEMISLAVHRNLLRLIGFCATPNEKLLVYPYMSNGSVASRLRGKPSLDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYFEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGAILEWVKKIQHEKKLEVLVDKELGSHYDWIEVGEMLQVALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWAASHNHGSFSISSFHSNNSNSSSSCPTTTASNSKHDRSHMFGKAVDDDDDGHSLDSYAMELSGPR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1307 638 Gene3D Transferase(Phosphotransferase) domain 1 372 583 - -
Alju06g1307 638 ProSiteProfiles Protein kinase domain profile. 295 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1307 638 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 575 - -
Alju06g1307 638 MobiDBLite consensus disorder prediction 609 628 - -
Alju06g1307 638 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Alju06g1307 638 SMART serkin_6 295 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g1307 638 Pfam Protein tyrosine and serine/threonine kinase 299 564 IPR001245 GO:0004672|GO:0006468
Alju06g1307 638 Pfam Leucine rich repeat 119 179 IPR001611 GO:0005515
Alju06g1307 638 Gene3D Phosphorylase Kinase; domain 1 266 371 - -
Alju06g1307 638 PRINTS Leucine-rich repeat signature 121 134 - -
Alju06g1307 638 PRINTS Leucine-rich repeat signature 166 179 - -
Alju06g1307 638 FunFam Putative LRR receptor-like serine/threonine-protein kinase 28 210 - -
Alju06g1307 638 FunFam Somatic embryogenesis receptor-like kinase 1 372 583 - -
Alju06g1307 638 SUPERFAMILY L domain-like 28 193 - -
Alju06g1307 638 SUPERFAMILY Protein kinase-like (PK-like) 278 565 IPR011009 -
Alju06g1307 638 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Alju06g1307 638 Gene3D Ribonuclease Inhibitor 28 210 IPR032675 -
Alju06g1307 638 FunFam Somatic embryogenesis receptor kinase 1 265 371 - -
Alju06g1307 638 MobiDBLite consensus disorder prediction 588 608 - -
Alju06g1307 638 MobiDBLite consensus disorder prediction 588 638 - -
Alju06g1307 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1307 Alju-ChrAlju06 13914939 13919011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1307 8 638 Receptor kinase-like Gene Family AT5G16000 63.721 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Alju06g1307 Pkinase 1e-40 CL0016