Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1305 ATGAGCAGTGGAAACCGAGTTTTGATGTGTAAATCAATTTCGCTCATCTTCACCCTACCTTCCTGTCTTTCTCGCACTCAACTTAGATCCAATTTCGTTGCAGCTCGGTCCCCAGCTGCTTCTAGGCTTTATCGGCAAATGGCCGCCGCAGCTTCATCCTCGCCTAACACGACCTCCGGCAATGTCAATGCTTCTTCTTCGACGTTTGCCGATGCAGCTCCTTCTGCTTCCTCTGCCATTGATTTCCTCTCTATATGTCACCGCCTAAAGACAACAAAAAGAGCAGGATGGATACGTAAAGATGTTAAGGATCCTGAATCGATAGCGGATCATATGTATCGAATGGGCTTGATGGCTCTGATTGCTTCAGATATCCCCGGCATAGACCGAAACAAGTGTATAAAAATGGCTATTGTTCACGATATTGCTGAAGCTATTGTTGGGGACATTACCCCGTCAGATGGTGTTTCAAAAGAAGAAAAGAGTAGACGAGAACGTGAAGCACTTGATCATATGTGTAAAGTGCTAGGTGGAGGATCTAGAGCAACGGAAATAGCTGAGCTGTGGATGGAGTATGAAGCAAATTCTTCACCAGAAGCTAAATTTGTCAAGGACCTTGACAAGGTGGAGATGATACTTCAAGCCTTAGAATATGAAGATGAACAGCAGAAGGATCTGGATGAATTTTTTGAGTCAACTGCTGGAAAGTTTCAGACTGAAACGGCCAAAGCTTGGGCATCGGAAATAGTATCAAGGAGGAAGAAAAATCAACACTCCAAAGCTCTTTTGTGCTGTATACTGAACTCAGGACTTGTTGCTAGCAATGAAGACCTGGAAGTTTTATGTGTTAAGAGGAAGATGATCATTCTTGATCAACTTTTTCCTCAGTGCCTTCTCCAATGCTTCAGGCTTCCTATTCCACTCTCTCATTCTCCGATGACGGAAACTGAAGAAACTCCCAAAGCTAACATTCTTGTGGAGAAGGCGTCTGGAGAAACGCCCCTCATTCTTGTTCTCCACTCCAACCTCAATCGAGATCCTGCTAAAGAGAGTCGCCGACAACGTTCACGAAGGAAGCCCGAGAATCCGTGCATGAATAAAGCCACCAAAATGCCGCAGGCGATTCTTAACCTTCAGGATGAGAAATACAGAGAATCTGCTCTAAGAAGGCTCAGCCATTTTCTTCTTGAGAAGAGGGAGCAAGATCTGGATAATTACTACAGTATTGGGCATATGTTGTACAATTCCTGCAGTACAATGACTATTTTGGTACAGGAGTTGTTGACGTTTTACAGAATGATGGATGATGGAAATCTCACTGCAAGAGCTTCCAAGCGCTTGGCAAATGTTCTTACCTTATTCCAGTGCATTGCAGCTGGTAAGGAGACAAGGCACAAATTTGTGAAATCTTTAATCCCCAATTTTCTGGTTCCACTAGTAACGTTTAGAGCTTCTCTGGAGGAATTTGAGGATGTTAGAGCTGTTGCTCTTTCTGTCATTGGCATCCTATGCCAGGCAAGAGAGTCAAACATCATTCAATGGGCTGTTGAAAGTAACATGGTGGAAGTATGCCGGATCAGTGTAGAGATCGGAAATGAACTCTCCAAAGTGGTAGGAATGTACATCATTGAAGCCATCCTACAAAACGACTCAGGATTGTCCTACATATGTAATCCCAAGTCTAAACTGCTTAAGAAACTGATGGCAACATGGTATCAACTGGTTATGTGTTTGGACCTTGAGCAAAGTTTCTCTCCTCGTCTCTTGTTTCATGTACTCCGGTGCTGTTTCCTGTTATGTAATAATATGAGGGGATATGCCATGATAAGAGATAACCTGCCAGATCCCATCTCAAATGGCTCTTTTCATCCAGTAATAGATGAGTTTCCTGTAATTGGAAGTTTGCTTCACCAACTTCTCCTGACTGTTGATAAGGTTGACAGCAGCAGAACAGCTTCTGAACGCTCGATCAGTGATGGATCATGCATAGAGAACTCCATTTAA 2004 0.4346 MSSGNRVLMCKSISLIFTLPSCLSRTQLRSNFVAARSPAASRLYRQMAAAASSSPNTTSGNVNASSSTFADAAPSASSAIDFLSICHRLKTTKRAGWIRKDVKDPESIADHMYRMGLMALIASDIPGIDRNKCIKMAIVHDIAEAIVGDITPSDGVSKEEKSRREREALDHMCKVLGGGSRATEIAELWMEYEANSSPEAKFVKDLDKVEMILQALEYEDEQQKDLDEFFESTAGKFQTETAKAWASEIVSRRKKNQHSKALLCCILNSGLVASNEDLEVLCVKRKMIILDQLFPQCLLQCFRLPIPLSHSPMTETEETPKANILVEKASGETPLILVLHSNLNRDPAKESRRQRSRRKPENPCMNKATKMPQAILNLQDEKYRESALRRLSHFLLEKREQDLDNYYSIGHMLYNSCSTMTILVQELLTFYRMMDDGNLTARASKRLANVLTLFQCIAAGKETRHKFVKSLIPNFLVPLVTFRASLEEFEDVRAVALSVIGILCQARESNIIQWAVESNMVEVCRISVEIGNELSKVVGMYIIEAILQNDSGLSYICNPKSKLLKKLMATWYQLVMCLDLEQSFSPRLLFHVLRCCFLLCNNMRGYAMIRDNLPDPISNGSFHPVIDEFPVIGSLLHQLLLTVDKVDSSRTASERSISDGSCIENSI 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1305 667 PANTHER UNCHARACTERIZED 33 260 IPR039356 GO:0002953
Alju06g1305 667 Gene3D Hypothetical protein af1432 64 262 - -
Alju06g1305 667 Pfam HD domain 86 244 IPR006674 -
Alju06g1305 667 SUPERFAMILY HD-domain/PDEase-like 75 252 - -
Alju06g1305 667 MobiDBLite consensus disorder prediction 346 364 - -
Alju06g1305 667 Gene3D - 363 645 IPR011989 -
Alju06g1305 667 Pfam Cell differentiation family, Rcd1-like 375 642 - -
Alju06g1305 667 ProSiteProfiles HD domain profile. 108 212 IPR006674 -
Alju06g1305 667 MobiDBLite consensus disorder prediction 346 366 - -
Alju06g1305 667 FunFam HD domain-containing protein 2 67 257 - -
Alju06g1305 667 SMART hd_13 104 221 IPR003607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1305 Alju-ChrAlju06 13893964 13905171 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Alju06g1305 Rcd1 3.4e-65 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1305 06 13893964 13905171 Alju06g1305 06 13893964 13905171 ECH