Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1284 ATGGCCCTCAACATCAATACAGTGCTTATCATTTTGGCCATCGTAAGCCTCGTTTCAGTGGCTTCTGCCATTTCTGGAACTGCCACCTTTTACACTAAATTAACTCCGTCAGCATGCTTTGGGGGCCGAGATGAGGGCACGATGATCGCGGCGGCGAGCAAGTCGGTGTGGAAGAACGGAGCAGCATGCGGAAAAAAGGTAAGAGTGAGGTGCACCGGAGGAACCACCGGCGGTATGGCTCACCCTTGCCGGCATGGAAGTATCACCGTCAAGATTGTTGATCTCTGCTTAAATTGCCAAGGAACCATCGATCTCTCTCGCCAAGCTTTCGCTGCTATCGCTAACCCTGTCGAAGGAAAAATCCGCATTGACTTCACCCAAAATGACCGAGAAATCAACATAACTTTATTAATCTCAAAATCAAATATCCAATATCACAGCCTGCACAAATATATATAG 459 0.4771 MALNINTVLIILAIVSLVSVASAISGTATFYTKLTPSACFGGRDEGTMIAAASKSVWKNGAACGKKVRVRCTGGTTGGMAHPCRHGSITVKIVDLCLNCQGTIDLSRQAFAAIANPVEGKIRIDFTQNDREINITLLISKSNIQYHSLHKYI 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1284 152 FunFam Barwin-related endoglucanase 23 127 - -
Alju06g1284 152 CDD DPBB_EG45-like 24 126 - -
Alju06g1284 152 Gene3D - 19 127 IPR036908 -
Alju06g1284 152 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 26 125 IPR007112 -
Alju06g1284 152 Pfam Lytic transglycolase 50 124 IPR009009 -
Alju06g1284 152 SUPERFAMILY Barwin-like endoglucanases 12 136 IPR036908 -
Alju06g1284 152 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 7 127 IPR044206 GO:0009627|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1284 Alju-ChrAlju06 13644326 13646926 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1284 49 122 Expansin Gene Family AT4G38400 39.189 2.93e-06 43.9