Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1283 ATGAAAGCAGTGTTCTTAATGGGACTTTCCATCGCAATAAGCCTCGTCTCAGTGGCTTCTGCTATTTCTGGAACTGCCACTTTTTACAATCAATACCTTCCTTCTGCATGCGATGGATTCCAAGATGAGGGAGTTATGATCGCGGCGGCGAGCGACTCGATCTGGAACAACGGAGCTGCGTGTGGAAGAAAGTACAGTGTCAGGTGCACTAGTGGTACCAACCAAGGTGTGGCTCACCCTTGCCGGAGTGGAACCGTCACCGTCAAGATCGTTGATCGCTGCCCTCCTCCGGCATGCAGAGGAACCATTGATCTCTCCCTTCAAGCTTTCTCTGCCATCGCTGACCCCAACGAAGGCAAAATCAACATTGAATACTCCCAGTAA 384 0.5078 MKAVFLMGLSIAISLVSVASAISGTATFYNQYLPSACDGFQDEGVMIAAASDSIWNNGAACGRKYSVRCTSGTNQGVAHPCRSGTVTVKIVDRCPPPACRGTIDLSLQAFSAIADPNEGKINIEYSQ 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1283 127 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 127 IPR044206 GO:0009627|GO:0048046
Alju06g1283 127 SMART dpbb_1 47 125 IPR007112 -
Alju06g1283 127 FunFam Barwin-related endoglucanase 21 127 - -
Alju06g1283 127 Gene3D - 21 127 IPR036908 -
Alju06g1283 127 Pfam Lytic transglycolase 48 125 IPR009009 -
Alju06g1283 127 CDD DPBB_EG45-like 22 126 - -
Alju06g1283 127 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 24 127 IPR007112 -
Alju06g1283 127 SUPERFAMILY Barwin-like endoglucanases 12 127 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1283 Alju-ChrAlju06 13608254 13609229 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1283 46 127 Expansin Gene Family AT2G45110 35.484 1.87e-08 49.3