Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1282 ATGATAGCAGCAGCAAGCGACCCAATCTTTAACAATGGAGCTGCATGTGGAAGAATGTACAGAATTACCTGCAAAGGTAGCCTCAGCATTGTTCCTGTTCCCTGCCGGAATGGAAACGTCACCATCAAGGTCGTCGACCGCTGCCCTTCTCCGGGATGCCGAGCTACCTTCGATCTCTCTCAGGAAGCCTTTTCCACTATTGCTAACCCTGCCGCAGGAATAGTCCTCATTGACTACGTCCAGGTCGATGCTTCTGGGAAGAGAATGTTCGGATGA 276 0.5109 MIAAASDPIFNNGAACGRMYRITCKGSLSIVPVPCRNGNVTIKVVDRCPSPGCRATFDLSQEAFSTIANPAAGIVLIDYVQVDASGKRMFG 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1282 91 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 1 81 IPR044206 GO:0009627|GO:0048046
Alju06g1282 91 Pfam Lytic transglycolase 3 79 IPR009009 -
Alju06g1282 91 SUPERFAMILY Barwin-like endoglucanases 1 84 IPR036908 -
Alju06g1282 91 CDD DPBB_EG45-like 1 80 - -
Alju06g1282 91 Gene3D - 1 84 IPR036908 -
Alju06g1282 91 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 1 82 IPR007112 -
Alju06g1282 91 SMART dpbb_1 2 79 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1282 Alju-ChrAlju06 13602670 13603597 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1282 3 82 Expansin Gene Family AT4G01630 37.634 5.13e-09 49.3