Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1280 ATGGCTCTCAACATTATGAAATCAGTGTTAGTAATGGGGCTTGCCATCTTGAGCCTTGTCTCAGTGGCATCTGCTATTGCTGGAACTGCCACCTTTTACACTGAATATACGCCATCGGCATGCTATGGATTTCAAGATCAAGGGACAATGATAGCAGCAGCAAGCGACCCAATCTTTAACAACAAAGCTGCATGTGGAAGAAGGTACAGAGTGAGGTGCACCAGTGGCACCAACAGTGTCCCGAATGCCTGCCGGGGAGGAAGCGTCACCGTCAAGGTCGTCGATCGCTGCCCTTCTCCGGGATGCCGAGCTACCTTGGACCTATCTCGGGAAGCTTTCTCTATCATTGCTAACCCTGACGCAGGAAAAGTCAACATTGACTACGTTCCGGCCTGA 396 0.5076 MALNIMKSVLVMGLAILSLVSVASAIAGTATFYTEYTPSACYGFQDQGTMIAAASDPIFNNKAACGRRYRVRCTSGTNSVPNACRGGSVTVKVVDRCPSPGCRATLDLSREAFSIIANPDAGKVNIDYVPA 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1280 131 FunFam Barwin-related endoglucanase 25 130 - -
Alju06g1280 131 Gene3D - 19 130 IPR036908 -
Alju06g1280 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 5 129 IPR044206 GO:0009627|GO:0048046
Alju06g1280 131 SMART dpbb_1 51 128 IPR007112 -
Alju06g1280 131 SUPERFAMILY Barwin-like endoglucanases 16 128 IPR036908 -
Alju06g1280 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 28 131 IPR007112 -
Alju06g1280 131 Pfam Lytic transglycolase 52 128 IPR009009 -
Alju06g1280 131 CDD DPBB_EG45-like 26 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1280 Alju-ChrAlju06 13468336 13469817 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1280 15 128 Expansin Gene Family AT2G40610 32.877 2.90e-07 45.8