Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1274 ATGAATGTGGTACTACTTCTGATCATGGGGTTTGCCATGGCAAGCCTTTTCTCAGTGTCATCAGCCGCTTCAGGAACTGCCACCTTTTACACCGAATACGTTCCTTCTGCATGCTATGGAAACAAGAACCAGGGAACTATGATCGCGGCAGCGAGCGACGCAATTTGGAACAATGGAGCCATATGCGGAAAAATGTATAAAATCAGGTGCACCGGAGCCACCAATCAAGGTGTGGCTAATCCTTGCCGGAGCGGAACCGTCACCGTCAAGATGGTCGACCGGTGCCCTTCTCCGGGATGCCAAGCAACCATCGATCTCTCTAGCCAAGCATTTGCCGCCATTGCTGATCCCGATGCAGGAAAAATCCGCATTACATACGACCAGTAA 387 0.509 MNVVLLLIMGFAMASLFSVSSAASGTATFYTEYVPSACYGNKNQGTMIAAASDAIWNNGAICGKMYKIRCTGATNQGVANPCRSGTVTVKMVDRCPSPGCQATIDLSSQAFAAIADPDAGKIRITYDQ 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1274 128 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 5 128 IPR044206 GO:0009627|GO:0048046
Alju06g1274 128 Pfam Lytic transglycolase 49 126 IPR009009 -
Alju06g1274 128 SUPERFAMILY Barwin-like endoglucanases 14 128 IPR036908 -
Alju06g1274 128 CDD DPBB_EG45-like 23 126 - -
Alju06g1274 128 SMART dpbb_1 48 126 IPR007112 -
Alju06g1274 128 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 25 128 IPR007112 -
Alju06g1274 128 Gene3D - 11 128 IPR036908 -
Alju06g1274 128 FunFam Barwin-related endoglucanase 22 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1274 Alju-ChrAlju06 13335356 13336103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1274 11 128 Expansin Gene Family AT2G45110 32.237 2.87e-09 51.6